Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10526X
         (423 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70211-4|CAA94159.1|  825|Caenorhabditis elegans Hypothetical pr...    31   0.34 
AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    31   0.34 
Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    28   2.4  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    28   2.4  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    28   2.4  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    28   2.4  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     28   2.4  
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    27   4.2  
AC006795-6|AAF59496.4|  217|Caenorhabditis elegans Hypothetical ...    27   4.2  
Z69637-3|CAA93468.1|  173|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U23484-15|AAC46762.1|  299|Caenorhabditis elegans Hypothetical p...    27   7.3  
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei...    26   9.7  
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family...    26   9.7  
AF003740-3|AAC48137.2|  365|Caenorhabditis elegans Eukaryotic in...    26   9.7  

>Z70211-4|CAA94159.1|  825|Caenorhabditis elegans Hypothetical
           protein K11E4.4 protein.
          Length = 825

 Score = 31.1 bits (67), Expect = 0.34
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +1

Query: 58  FVSVALLIATVVMASSADTDPPRHYDLNQAKELFESIVKEHNREYKD 198
           F++ AL + T +M S AD  P     L + ++  E +VK  +REYK+
Sbjct: 350 FMNAALELRTALM-SYADNHPDAVEVLKKKQKELEKVVKSQDREYKE 395


>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 31.1 bits (67), Expect = 0.34
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +1

Query: 157 FESIVKEHNREYKDDADRELHYQSFKKNLAEIN 255
           FE   K++NR+YKD+++ +  + +F K+   ++
Sbjct: 43  FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVD 75


>Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical
           protein F33A8.7 protein.
          Length = 168

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +1

Query: 55  NFVSVAL-LIATVVMASSA-DTDPPRHYDLNQAKELFESIVKEHNRE 189
           N+V V L L+ATVV+++ A DTD     DLNQ    +  ++  H  E
Sbjct: 7   NYVLVLLVLLATVVLSNQAQDTDVQHRKDLNQI-NYYNWLLHRHRTE 52


>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 250  SLPSFS*MIDNAALCRHHPC-IPCYVL*RYSRTILWLD*GHNVSED 116
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6177 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6222



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 130  YDLNQAKELFESIVKEHNREYKDDA 204
            Y+     ELFE +  EHN+  +D+A
Sbjct: 5806 YEFMSGGELFEKVADEHNKMSEDEA 5830


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 250  SLPSFS*MIDNAALCRHHPC-IPCYVL*RYSRTILWLD*GHNVSED 116
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6706 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6751



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 130  YDLNQAKELFESIVKEHNREYKDDA 204
            Y+     ELFE +  EHN+  +D+A
Sbjct: 6335 YEFMSGGELFEKVADEHNKMSEDEA 6359


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 250  SLPSFS*MIDNAALCRHHPC-IPCYVL*RYSRTILWLD*GHNVSED 116
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6387 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6432



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 130  YDLNQAKELFESIVKEHNREYKDDA 204
            Y+     ELFE +  EHN+  +D+A
Sbjct: 6016 YEFMSGGELFEKVADEHNKMSEDEA 6040


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 250  SLPSFS*MIDNAALCRHHPC-IPCYVL*RYSRTILWLD*GHNVSED 116
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6177 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6222



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 130  YDLNQAKELFESIVKEHNREYKDDA 204
            Y+     ELFE +  EHN+  +D+A
Sbjct: 5806 YEFMSGGELFEKVADEHNKMSEDEA 5830


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 250  SLPSFS*MIDNAALCRHHPC-IPCYVL*RYSRTILWLD*GHNVSED 116
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6706 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6751



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 130  YDLNQAKELFESIVKEHNREYKDDA 204
            Y+     ELFE +  EHN+  +D+A
Sbjct: 6335 YEFMSGGELFEKVADEHNKMSEDEA 6359


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 250  SLPSFS*MIDNAALCRHHPC-IPCYVL*RYSRTILWLD*GHNVSED 116
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6387 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6432



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 130  YDLNQAKELFESIVKEHNREYKDDA 204
            Y+     ELFE +  EHN+  +D+A
Sbjct: 6016 YEFMSGGELFEKVADEHNKMSEDEA 6040


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 250  SLPSFS*MIDNAALCRHHPC-IPCYVL*RYSRTILWLD*GHNVSED 116
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 5596 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 5641



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 130  YDLNQAKELFESIVKEHNREYKDDA 204
            Y+     ELFE +  EHN+  +D+A
Sbjct: 5225 YEFMSGGELFEKVADEHNKMSEDEA 5249


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 127 HYDLNQAKELFES-IVKEHNREYKDDADRELHYQ 225
           HYD+ QA   FES  + + N++++D   +E + Q
Sbjct: 192 HYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 157 FESIVKEHNREYKDDADRELHYQSF 231
           FE  + ++ R YKD+ +++  +Q F
Sbjct: 47  FEDFIVKYKRNYKDEIEKKFRFQQF 71


>AC006795-6|AAF59496.4|  217|Caenorhabditis elegans Hypothetical
           protein Y50D4B.2 protein.
          Length = 217

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 201 CRQRAALSIIQEKLGRDKQLNEKSPYTTFGMNKFHDY 311
           C   AAL+++++K    K+    +P   FG +K +DY
Sbjct: 165 CVLSAALALVKDKNNLPKEGGVYTPAAAFGDSKIYDY 201


>Z69637-3|CAA93468.1|  173|Caenorhabditis elegans Hypothetical
           protein F35G2.3 protein.
          Length = 173

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 61  VSVALLIATVVMASSADTDPPRHYDLNQAKELFESIVKEHNREYK 195
           V+VALL+  +V     +     HY L    E  E ++KEH +E K
Sbjct: 14  VTVALLMLQIV-----EEKAKAHYQLKLMCESSEEMIKEHQKEMK 53


>U23484-15|AAC46762.1|  299|Caenorhabditis elegans Hypothetical
           protein EEED8.2 protein.
          Length = 299

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 178 HNREYKDDADRELHYQSFKKNLAEI 252
           H R +K  A  E+HY +F  +L E+
Sbjct: 199 HERSWKPRAREEIHYFNFPNSLGEL 223


>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
           protein.
          Length = 2427

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 163 SIVKEHNREYKDDADRELHYQSFKKNLAEIN 255
           SI K+H++  +D  +    +Q FK++  E+N
Sbjct: 44  SIFKDHSQTKRDRLEEARQFQYFKRDADELN 74


>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
            protein 3 protein.
          Length = 3343

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
 Frame = +2

Query: 146  PKNCSRVSSKN------ITGNTRMMPTESCIINH 229
            P NCS V  +N      I  N  ++PT+S +INH
Sbjct: 1040 PSNCSNVKLQNLKTSLQIHENNLLIPTQSELINH 1073


>AF003740-3|AAC48137.2|  365|Caenorhabditis elegans Eukaryotic
           initiation factor protein3.H protein.
          Length = 365

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +1

Query: 25  VPLLIHCAKMNFVSVALLIATVVMASSADTDPPRHYDLNQAKELFESI 168
           +P++I  + +N V ++ L  ++  + S+D    RH+DL   K L +S+
Sbjct: 194 LPIIIKSSYLNNVLMSEL--SLAKSCSSDKYSTRHFDLGSKKSLEKSV 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,381,373
Number of Sequences: 27780
Number of extensions: 177110
Number of successful extensions: 501
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)