Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10526X
(423 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 33 0.080
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 33 0.080
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 33 0.080
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ... 31 0.24
At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containi... 31 0.32
At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 29 1.3
At2g27420.1 68415.m03314 cysteine proteinase, putative contains ... 29 1.7
At1g69260.1 68414.m07939 expressed protein 28 2.3
At2g07678.1 68415.m00915 hypothetical protein 28 3.0
At4g03120.1 68417.m00425 proline-rich family protein similar to ... 27 4.0
At5g37780.1 68418.m04549 calmodulin-1/4 (CAM1) identical to calm... 27 5.2
At1g66410.1 68414.m07542 calmodulin-1/4 (CAM4) identical to calm... 27 5.2
At5g38790.1 68418.m04690 expressed protein predicted protein, Ar... 27 6.9
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 27 6.9
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 27 6.9
At5g28730.1 68418.m03529 hypothetical protein 26 9.1
At5g21274.1 68418.m02533 calmodulin-6 (CAM6) identical to calmod... 26 9.1
At4g28420.1 68417.m04068 aminotransferase, putative tsimilar to ... 26 9.1
At3g43810.1 68416.m04682 calmodulin-7 (CAM7) almost identical to... 26 9.1
At3g14140.1 68416.m01788 oxidoreductase, 2OG-Fe(II) oxygenase fa... 26 9.1
At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 26 9.1
>At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 288
Score = 33.1 bits (72), Expect = 0.080
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 121 PRHY-DLNQAKELFESIVKEHNREYKDDADRELHYQSFKKNLAEIN 255
P H + ++ ELFES + EH++ YK ++ ++ F++NL I+
Sbjct: 38 PEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHID 83
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 33.1 bits (72), Expect = 0.080
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 121 PRHY-DLNQAKELFESIVKEHNREYKDDADRELHYQSFKKNLAEIN 255
P H + ++ ELFES + EH++ YK ++ ++ F++NL I+
Sbjct: 38 PEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHID 83
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 33.1 bits (72), Expect = 0.080
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +1
Query: 61 VSV-ALLIATVVMASSADTDPPR-HYDLNQAK--ELFESIVKEHNREYKDDADRELHYQS 228
VSV ++ +A +++ R H LN+ + + + + +R YKD++++E+ +
Sbjct: 2 VSVRSVFVALTILSMDLRISQARPHVTLNEQSIVDYHQQWMTQFSRVYKDESEKEMRLKV 61
Query: 229 FKKNLAEINN 258
FKKNL I N
Sbjct: 62 FKKNLKFIEN 71
>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 364
Score = 31.5 bits (68), Expect = 0.24
Identities = 28/99 (28%), Positives = 45/99 (45%)
Frame = +1
Query: 7 LGTSKPVPLLIHCAKMNFVSVALLIATVVMASSADTDPPRHYDLNQAKELFESIVKEHNR 186
+G++K L++ A M S A I V++ + +D +A +FES + +H +
Sbjct: 1 MGSAKSAMLILLVA-MVIASCATAIDMSVVSYDDNNRLHSVFDA-EASLIFESWMVKHGK 58
Query: 187 EYKDDADRELHYQSFKKNLAEINN*TRRVHILRLA*TNF 303
Y A++E F+ NL INN RL T F
Sbjct: 59 VYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGF 97
>At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containing
protein and genefinder
Length = 559
Score = 31.1 bits (67), Expect = 0.32
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3
Query: 409 FVWNSIPID*SRSSYVSLAGSLNPNLLCCSSGV*S*NLFMPNV 281
FVWN+I SRSS+ +A S+ ++LC S V L P+V
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
>At2g34080.1 68415.m04172 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 345
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 160 ESIVKEHNREYKDDADRELHYQSFKKNLAEINN 258
E + +REY+D+ ++ + FKKNL I N
Sbjct: 40 EQWMARFSREYRDELEKNMRRDVFKKNLKFIEN 72
>At2g27420.1 68415.m03314 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 348
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 145 AKELFESIVKEHNREYKDDADRELHYQSFKKNLAEINN 258
A E E + NR Y D+ ++ + FKKNL + N
Sbjct: 31 AIEKHEQWMARFNRVYSDETEKRNRFNIFKKNLEFVQN 68
>At1g69260.1 68414.m07939 expressed protein
Length = 345
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 308 LYS*GTAEQVRIEAAC*GDITTPTSVYRNA 397
LY G+ E+VRI C GD +P ++A
Sbjct: 293 LYRYGSGEEVRIMCVCHGDFLSPADFVKHA 322
>At2g07678.1 68415.m00915 hypothetical protein
Length = 245
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 270 SSRSIVYLCQVFLE*LIMQLSVGIILVFPVMFFDDTL 160
+SR+ V+ C +F ++M+++ G +L P + F D L
Sbjct: 124 NSRTAVFFCILFSITVLMEIAPGPLLKKPSLLFSDNL 160
>At4g03120.1 68417.m00425 proline-rich family protein similar to U1
small nuclear ribonucleoprotein C; contains proline rich
extensin domains, INTERPRO:IPR002965
Length = 207
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 163 SIVKEHNREYKDDADRELHYQSFKK 237
S+ K+HN YK A+ ++YQ F++
Sbjct: 19 SVRKQHNAGYKHKANVRIYYQQFEE 43
>At5g37780.1 68418.m04549 calmodulin-1/4 (CAM1) identical to
calmodulin 4 [Arabidopsis thaliana] GI:16223, SP|P25854
Calmodulin-1/4 {Arabidopsis thaliana}
Length = 149
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 124 RHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKK 237
RH N ++L + V+E RE D D +++Y+ F K
Sbjct: 107 RHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVK 144
>At1g66410.1 68414.m07542 calmodulin-1/4 (CAM4) identical to
calmodulin [Arabidopsis thaliana] GI:16223; nearly
identical to SP|P25854 Calmodulin-1/4 {Arabidopsis
thaliana}
Length = 149
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 124 RHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKK 237
RH N ++L + V+E RE D D +++Y+ F K
Sbjct: 107 RHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVK 144
>At5g38790.1 68418.m04690 expressed protein predicted protein,
Arabidopsis thaliana; expression supported by MPSS
Length = 131
Score = 26.6 bits (56), Expect = 6.9
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 94 MASSADTDP--PRHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKK 237
MAS A + P R + N+A +L ++ E N + K+D D HY KK
Sbjct: 61 MASDASSGPNYQRFHQKNKALDL-KNGKNEGNSKSKNDDDHHNHYHDGKK 109
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 181 NREYKDDADRELHYQS 228
N E+KD+ +R LHY+S
Sbjct: 10 NMEFKDEEERNLHYKS 25
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 181 NREYKDDADRELHYQS 228
N E+KD+ +R LHY+S
Sbjct: 10 NMEFKDEEERNLHYKS 25
>At5g28730.1 68418.m03529 hypothetical protein
Length = 296
Score = 26.2 bits (55), Expect = 9.1
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -1
Query: 354 QAASIRTCSAVPQEYNHEICSCQT*YMDSSRSIVYLCQVFLE*LIMQLSVGIILVFPVMF 175
+ A++ C A Q Y++E+ SCQT SS + LC++ +Q S I L V
Sbjct: 5 EEANMEECIA-HQIYSNEV-SCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAI 62
Query: 174 F 172
F
Sbjct: 63 F 63
>At5g21274.1 68418.m02533 calmodulin-6 (CAM6) identical to
calmodulin-6 SP:Q03509 from [Arabidopsis thaliana];
contains Pfam profile: PF00036 EF hand
Length = 149
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 124 RHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKK 237
RH N ++L + V E RE D D +++Y+ F K
Sbjct: 107 RHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEEFVK 144
>At4g28420.1 68417.m04068 aminotransferase, putative tsimilar to
nicotianamine aminotransferase from Hordeum vulgare
[GI:6498122, GI:6469087]; contains Pfam profile PF00155
aminotransferase, classes I and II
Length = 389
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 389 DRLKSE*LCLLSRQPQSEPALLFLRSIIMKFVHAKRSIWTLLV 261
DRLK + +++P+S LL + H RSIW +L+
Sbjct: 346 DRLKEIPCLVCNKKPESCTYLLVPPPTSLILFHDSRSIWMILI 388
>At3g43810.1 68416.m04682 calmodulin-7 (CAM7) almost identical to
calmodulin GI:16227 from [Arabidopsis thaliana],
SP|P59220 Calmodulin-7 {Arabidopsis thaliana}
Length = 149
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 124 RHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKK 237
RH N ++L + V E RE D D +++Y+ F K
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
>At3g14140.1 68416.m01788 oxidoreductase, 2OG-Fe(II) oxygenase
family protein low similarity to alkB protein
[Escherichia coli][SP|P05050], alkB [Caulobacter
crescentus][GI:2055386]; contains Pfam domain PF03171
2OG-Fe(II) oxygenase superfamily
Length = 452
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 286 LA*TNFMIILLRNSRAGSD*GCLLRRHNYSDFSLSECYSR 405
+A TN+ +I + N + D L +YS F EC ++
Sbjct: 1 MATTNYSMIFIGNLQVAVDRSSLYESSDYSSFVARECLNK 40
>At1g29090.1 68414.m03561 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 355
Score = 26.2 bits (55), Expect = 9.1
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 58 FVSVALLIATVVMASSADTDPPRHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKK 237
F+ V+L I ++ + S T ++ A E + + +R Y D+ ++++ + FKK
Sbjct: 15 FMLVSLTILSMNLKVSQATSRVTFHEPIVA-EHHQQWMTRFSRVYSDELEKQMRFDVFKK 73
Query: 238 NL 243
NL
Sbjct: 74 NL 75
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,652,458
Number of Sequences: 28952
Number of extensions: 158467
Number of successful extensions: 430
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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