Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10525
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YXB9 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q4XB18 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_A7SSC9 Cluster: Predicted protein; n=1; Nematostella ve...    33   5.5  
UniRef50_A7RH26 Cluster: Predicted protein; n=2; Nematostella ve...    33   7.3  
UniRef50_Q18007 Cluster: Probable muscarinic acetylcholine recep...    33   9.7  

>UniRef50_Q4YXB9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 104

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 185 YIHTYIIKYFYIYHTVCTTTYYIA*RYFIHLNIS*KINRILETIIVYMCFF 33
           YIHT+  KY + Y      TY+IA      ++IS KIN   ++     C +
Sbjct: 37  YIHTHTYKYIHTYKYTYKHTYFIAILKIYIMHISQKINEYCQSFFFSKCLY 87


>UniRef50_Q4XB18 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 48

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = -1

Query: 191 MLYIHTYIIKYFYIY---HTVCTTTYYIA*RYFIHLNIS*KI 75
           ++++  YIIK FY+Y    +VCT   ++A RY+I++    KI
Sbjct: 3   IIFLFLYIIKAFYLYALNTSVCTVRIFLAFRYYIYMYAHRKI 44


>UniRef50_A7SSC9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 353

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -3

Query: 186 VHTYIYNKILLYLSHCLHYYILHSVKVFHSPQYFLKDKSHIGDDHCLHV 40
           V  Y+ + + +YLSH +  Y+ HSV ++ S    ++   H+ +  C HV
Sbjct: 113 VDKYLSHSVDMYLSHNVDMYLSHSVDMYLSHNVDIELCGHVPEPKCGHV 161


>UniRef50_A7RH26 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 259

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
 Frame = -3

Query: 201 PCLYVVHT---YIYNKILLYLSHCLHYYILHS--VKVFHSPQYFL 82
           PCLY++HT   Y+ +   LYL H    Y++H+  + + H+P  +L
Sbjct: 1   PCLYLIHTPCLYLIHTPCLYLIHTPCLYLIHTPCLYLIHTPCLYL 45



 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
 Frame = -3

Query: 201 PCLYVVHT---YIYNKILLYLSHCLHYYILHS--VKVFHSPQYFL 82
           PCLY++HT   Y+ +   LYL H    Y++H+  + + H+P  +L
Sbjct: 81  PCLYLIHTPCLYLIHTPCLYLIHTPCLYLIHTPCLYLIHTPCLYL 125



 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
 Frame = -3

Query: 201 PCLYVVHT---YIYNKILLYLSHCLHYYILHS--VKVFHSPQYFL 82
           PCLY++HT   Y+ +   LYL H    Y++H+  + + H+P  +L
Sbjct: 161 PCLYLIHTPCLYLIHTPCLYLLHTPCLYLIHTPCLYLIHTPCLYL 205


>UniRef50_Q18007 Cluster: Probable muscarinic acetylcholine receptor
           gar-1; n=4; Caenorhabditis|Rep: Probable muscarinic
           acetylcholine receptor gar-1 - Caenorhabditis elegans
          Length = 713

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +3

Query: 21  IVRTEKTHVNNDRLQYAIYLSRNIEVNEIPSRYVVCSS-ADSVINIKVFYYICMYVQHID 197
           IV + +T + N  +  A  + RNI   ++ +RY+V  + +D +I I+ F +  +YV + D
Sbjct: 32  IVLSLETIIGNAMVVMAYRIERNIS-KQVSNRYIVSLAISDLIIGIEGFPFFTVYVLNGD 90

Query: 198 RGRVLWL 218
           R  + W+
Sbjct: 91  RWPLGWV 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,619,219
Number of Sequences: 1657284
Number of extensions: 12636018
Number of successful extensions: 24298
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24024
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)