Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10525
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.4  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 143 CDKYKSILLYMYVCTTYRQGKGSLVK 220
           CD Y +I    YVCT +     SLV+
Sbjct: 14  CDVYTAIHPLFYVCTFFGLAPYSLVR 39


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 143 CDKYKSILLYMYVCTTYRQGKGSLVK 220
           CD Y +I    YVCT +     SLV+
Sbjct: 14  CDVYTAIHPLFYVCTFFGLAPYSLVR 39


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 230 KMSL*PKNPSPVYMLYIHTYIIKY 159
           KM L PK P P+ +LY    II++
Sbjct: 44  KMPLLPKTPLPLTLLYKLLGIIQF 67


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = -1

Query: 197 VYMLYIHTYIIKY----FYIYHTVCTTTYYIA 114
           +++LYI    I Y    FYI H  C+T + ++
Sbjct: 630 LHLLYIFLVGIMYAADVFYICHVCCSTIHEVS 661


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,746
Number of Sequences: 336
Number of extensions: 3910
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)