Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10523
         (773 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p pro...    63   5e-10
AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA...    63   5e-10
AY071635-1|AAL49257.1|  242|Drosophila melanogaster RE67916p pro...    29   9.4  
AE014297-402|AAF51919.2|  242|Drosophila melanogaster CG15582-PA...    29   9.4  

>AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p
           protein.
          Length = 341

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = +2

Query: 65  FRTHFYNQCNDVALMTYLGTITKGCNAINQLVNRFKVLYD 184
           F+  FY QCNDV L++YLGT+TKGCN ++  VN+F +LYD
Sbjct: 289 FQEEFYTQCNDVGLISYLGTLTKGCNDMHHFVNKFNMLYD 328


>AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA
           protein.
          Length = 341

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = +2

Query: 65  FRTHFYNQCNDVALMTYLGTITKGCNAINQLVNRFKVLYD 184
           F+  FY QCNDV L++YLGT+TKGCN ++  VN+F +LYD
Sbjct: 289 FQEEFYTQCNDVGLISYLGTLTKGCNDMHHFVNKFNMLYD 328


>AY071635-1|AAL49257.1|  242|Drosophila melanogaster RE67916p
           protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 436 HNSIPIFRRFHFCELFYFYTN--SYVQFIIITVHKQNIHNICSYKTNCTIYFADGTRY*R 263
           +  IP F R +  E+F FY N   + +  I+ V  + ++  C  K    + F  G    +
Sbjct: 59  YEEIPCFTRCYLSEMFDFYNNLTGFNKDGIVGVFGRPVYEACRKKLE--LPFESGESSCK 116

Query: 262 HSFISFMILTS 230
           H++  F  +T+
Sbjct: 117 HAYEGFHCITN 127


>AE014297-402|AAF51919.2|  242|Drosophila melanogaster CG15582-PA
           protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 436 HNSIPIFRRFHFCELFYFYTN--SYVQFIIITVHKQNIHNICSYKTNCTIYFADGTRY*R 263
           +  IP F R +  E+F FY N   + +  I+ V  + ++  C  K    + F  G    +
Sbjct: 59  YEEIPCFTRCYLSEMFDFYNNLTGFNKDGIVGVFGRPVYEACRKKLE--LPFESGESSCK 116

Query: 262 HSFISFMILTS 230
           H++  F  +T+
Sbjct: 117 HAYEGFHCITN 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,164,993
Number of Sequences: 53049
Number of extensions: 534259
Number of successful extensions: 1006
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)