Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10523
         (773 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098993-2|AAC67466.1|  549|Caenorhabditis elegans Hypothetical ...    31   0.91 
Z92813-2|CAB07284.1|  353|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z48582-5|CAA88467.3|  377|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z81593-7|CAB63316.2|  400|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AF026213-3|AAP68945.1|  161|Caenorhabditis elegans Hypothetical ...    28   8.5  

>AF098993-2|AAC67466.1|  549|Caenorhabditis elegans Hypothetical
           protein T10B11.2 protein.
          Length = 549

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 281 RYPLLTSFVHFF--YDINVRPKRRVLACAFPCPVCRR 177
           R+P+    V F   +  NV PK ++  C  PCPVC +
Sbjct: 359 RHPIYRGMVQFSLSHKENVNPKDQLPPCLEPCPVCMK 395


>Z92813-2|CAB07284.1|  353|Caenorhabditis elegans Hypothetical
           protein T28A8.2 protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 445 SLPHNSIPIFRRFHFCELFYFYTNSYVQF 359
           SL  N +P FR F FC++F+F   ++  F
Sbjct: 243 SLIQNQVPNFRFFLFCKIFFFSKAAHSTF 271


>Z48582-5|CAA88467.3|  377|Caenorhabditis elegans Hypothetical
           protein F27E5.5 protein.
          Length = 377

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 567 FKLTCMNEICLL*NHNSSLKYFFPLILYQVINNLF 671
           FKLT + EI  +  +  S+    P+I+  +++N+F
Sbjct: 225 FKLTSLTEIYQISENVKSISLLIPIIVVMIVSNIF 259


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = -2

Query: 223 KEESSHA-PSHALSVVEHFESIHK--LIDSVAALRDRS*VCHQGYIVALIIEMCPE 65
           +  S HA  +H + +  +F +I K  L++ +    + S  CHQG  V L  + C E
Sbjct: 584 RRASRHALETHRIPLQNNFATITKKRLVEEILGRVEPSIACHQGVKVGLYSDACNE 639


>Z81593-7|CAB63316.2|  400|Caenorhabditis elegans Hypothetical
           protein T20B3.13 protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = -2

Query: 598 KHISFIHVSLKKKFKKSILEGVYDAILTLQKLTRL*YFILK 476
           +H   +H ++  +FKK +L G+ +  L L     + +F+++
Sbjct: 76  RHFGILHYTVNNRFKKMMLIGIINVFLILAFFLFMFFFVVQ 116


>AF026213-3|AAP68945.1|  161|Caenorhabditis elegans Hypothetical
           protein F08F1.4b protein.
          Length = 161

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 579 CMNEICLL*NHNSSLKYFFPLILYQVINNLFFF*FKSTLI 698
           CM+ I +  N N ++    P ILY  +  LFF  FK+++I
Sbjct: 103 CMDIITIRNNENDTIT---PKILYGFLQKLFFLKFKTSVI 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,766
Number of Sequences: 27780
Number of extensions: 309402
Number of successful extensions: 779
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)