Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10522
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.6  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   6.3  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   8.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 428 PNKGSSLPNAD*VQMTKRPRWPPGA 354
           P  G   P    V M  RP+ PPGA
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGA 236


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 427 GSWKTPSKQKKNFNLPQPK 483
           G  K P K+KK  +LP+P+
Sbjct: 153 GQSKQPKKKKKKRSLPKPE 171


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = -2

Query: 605 RLVISEWVQFACSTDHAFVGSTEDLPDLIRLERRVRSVLAIFGWGRL 465
           RL+ +EW +   +   +F  ST+ LP  + L + +   + + G  ++
Sbjct: 256 RLINTEWPRSRMARFWSFETSTDMLPITLVLTQLIDETVTVLGHAKV 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,830
Number of Sequences: 2352
Number of extensions: 12197
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)