Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10522
(645 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 120 2e-27
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 120 2e-27
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 120 2e-27
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 73 3e-13
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 39 0.007
BT003309-1|AAO25069.1| 311|Drosophila melanogaster GH05823p pro... 29 5.4
AE013599-2927|AAM68421.1| 404|Drosophila melanogaster CG9218-PB... 29 5.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 120 bits (288), Expect = 2e-27
Identities = 51/83 (61%), Positives = 63/83 (75%)
Frame = +1
Query: 250 GTLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFG 429
G L++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LFG
Sbjct: 209 GPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 430 SWKTPSKQKKNFNLPQPKMANTD 498
+WK PS KK +NLPQPKMANTD
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANTD 291
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +2
Query: 119 QQDQXAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 256
Q+ + AVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GP
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGP 210
Score = 58.4 bits (135), Expect = 8e-09
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 510 LKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 623
LKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNP
Sbjct: 296 LKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNP 333
Score = 38.7 bits (86), Expect = 0.007
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +3
Query: 48 QARGHIIEKIPELPLVVADKVQEINKT 128
Q++GH+I+ + E PLVV+D+VQ++ KT
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKT 167
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 120 bits (288), Expect = 2e-27
Identities = 51/83 (61%), Positives = 63/83 (75%)
Frame = +1
Query: 250 GTLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFG 429
G L++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LFG
Sbjct: 209 GPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 430 SWKTPSKQKKNFNLPQPKMANTD 498
+WK PS KK +NLPQPKMANTD
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANTD 291
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +2
Query: 119 QQDQXAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 256
Q+ + AVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GP
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGP 210
Score = 58.4 bits (135), Expect = 8e-09
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 510 LKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 623
LKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNP
Sbjct: 296 LKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNP 333
Score = 38.7 bits (86), Expect = 0.007
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +3
Query: 48 QARGHIIEKIPELPLVVADKVQEINKT 128
Q++GH+I+ + E PLVV+D+VQ++ KT
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKT 167
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 120 bits (288), Expect = 2e-27
Identities = 51/83 (61%), Positives = 63/83 (75%)
Frame = +1
Query: 250 GTLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFG 429
G L++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LFG
Sbjct: 209 GPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268
Query: 430 SWKTPSKQKKNFNLPQPKMANTD 498
+WK PS KK +NLPQPKMANTD
Sbjct: 269 TWKKPSTLKKGYNLPQPKMANTD 291
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +2
Query: 119 QQDQXAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 256
Q+ + AVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GP
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGP 210
Score = 58.4 bits (135), Expect = 8e-09
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 510 LKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 623
LKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNP
Sbjct: 296 LKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNP 333
Score = 38.7 bits (86), Expect = 0.007
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +3
Query: 48 QARGHIIEKIPELPLVVADKVQEINKT 128
Q++GH+I+ + E PLVV+D+VQ++ KT
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKT 167
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +2
Query: 119 QQDQXAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 256
Q+ + AVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GP
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGP 210
Score = 38.7 bits (86), Expect = 0.007
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +3
Query: 48 QARGHIIEKIPELPLVVADKVQEINKT 128
Q++GH+I+ + E PLVV+D+VQ++ KT
Sbjct: 141 QSKGHVIDGVSEFPLVVSDEVQKVQKT 167
Score = 34.3 bits (75), Expect = 0.14
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 250 GTLIIFNKDQGLTRAFRNIP 309
G L++++KD+GL +AFRNIP
Sbjct: 209 GPLVVYDKDEGLRKAFRNIP 228
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 38.7 bits (86), Expect = 0.007
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +3
Query: 48 QARGHIIEKIPELPLVVADKVQEINKT 128
Q++GH+I+ + E PLVV+D+VQ++ KT
Sbjct: 79 QSKGHVIDGVSEFPLVVSDEVQKVQKT 105
Score = 32.3 bits (70), Expect = 0.58
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 119 QQDQXAVIFLRRLKAWSDILK 181
Q+ + AVIFLRRLK W+DI K
Sbjct: 103 QKTKQAVIFLRRLKIWADIQK 123
>BT003309-1|AAO25069.1| 311|Drosophila melanogaster GH05823p
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 404 NAD*VQMTKRPRWPPGASFRRFSLLTFRSSTPGMLRKARVRP*SLLKIMRVPYAGYDDGC 225
NA Q + P PGA+F F + ++TP + A + P L+K G +
Sbjct: 100 NAGLYQTNEPPLLGPGAAFPPFGAPEYHTTTPENWKGAAIHPTGLMKEPAGVVPGRNAPV 159
Query: 224 AFYP 213
AF P
Sbjct: 160 AFTP 163
>AE013599-2927|AAM68421.1| 404|Drosophila melanogaster CG9218-PB,
isoform B protein.
Length = 404
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 404 NAD*VQMTKRPRWPPGASFRRFSLLTFRSSTPGMLRKARVRP*SLLKIMRVPYAGYDDGC 225
NA Q + P PGA+F F + ++TP + A + P L+K G +
Sbjct: 100 NAGLYQTNEPPLLGPGAAFPPFGAPEYHTTTPENWKGAAIHPTGLMKEPAGVVPGRNAPV 159
Query: 224 AFYP 213
AF P
Sbjct: 160 AFTP 163
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,229,873
Number of Sequences: 53049
Number of extensions: 580728
Number of successful extensions: 1505
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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