Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10521
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 82 2e-15
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 82 2e-15
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 82 2e-15
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 82 2e-15
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 82 2e-15
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 82 2e-15
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 81.8 bits (193), Expect = 2e-15
Identities = 37/70 (52%), Positives = 54/70 (77%)
Frame = +1
Query: 1 VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ +E GVE
Sbjct: 101 LLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVE 160
Query: 181 RFIHLSYLNA 210
+FIH+S+LNA
Sbjct: 161 KFIHVSHLNA 170
Score = 74.9 bits (176), Expect = 3e-13
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
+K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV
Sbjct: 181 NKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHR--FGPIPLGSLGWKTVKQPV 238
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLGQNATYLPIWLIGF 560
+V DV++GIVNA +D D + + +G + YL L+ +
Sbjct: 239 YVVDVSKGIVNAVKDPDANGKSFAFVGP-SRYLLFHLVKY 277
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 81.8 bits (193), Expect = 2e-15
Identities = 37/70 (52%), Positives = 54/70 (77%)
Frame = +1
Query: 1 VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ +E GVE
Sbjct: 103 LLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVE 162
Query: 181 RFIHLSYLNA 210
+FIH+S+LNA
Sbjct: 163 KFIHVSHLNA 172
Score = 74.9 bits (176), Expect = 3e-13
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
+K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV
Sbjct: 183 NKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHR--FGPIPLGSLGWKTVKQPV 240
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLGQNATYLPIWLIGF 560
+V DV++GIVNA +D D + + +G + YL L+ +
Sbjct: 241 YVVDVSKGIVNAVKDPDANGKSFAFVGP-SRYLLFHLVKY 279
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 81.8 bits (193), Expect = 2e-15
Identities = 37/70 (52%), Positives = 54/70 (77%)
Frame = +1
Query: 1 VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ +E GVE
Sbjct: 103 LLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVE 162
Query: 181 RFIHLSYLNA 210
+FIH+S+LNA
Sbjct: 163 KFIHVSHLNA 172
Score = 74.9 bits (176), Expect = 3e-13
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
+K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV
Sbjct: 183 NKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHR--FGPIPLGSLGWKTVKQPV 240
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLGQNATYLPIWLIGF 560
+V DV++GIVNA +D D + + +G + YL L+ +
Sbjct: 241 YVVDVSKGIVNAVKDPDANGKSFAFVGP-SRYLLFHLVKY 279
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 81.8 bits (193), Expect = 2e-15
Identities = 37/70 (52%), Positives = 54/70 (77%)
Frame = +1
Query: 1 VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ +E GVE
Sbjct: 103 LLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVE 162
Query: 181 RFIHLSYLNA 210
+FIH+S+LNA
Sbjct: 163 KFIHVSHLNA 172
Score = 74.9 bits (176), Expect = 3e-13
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
+K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV
Sbjct: 183 NKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHR--FGPIPLGSLGWKTVKQPV 240
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLGQNATYLPIWLIGF 560
+V DV++GIVNA +D D + + +G + YL L+ +
Sbjct: 241 YVVDVSKGIVNAVKDPDANGKSFAFVGP-SRYLLFHLVKY 279
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 81.8 bits (193), Expect = 2e-15
Identities = 37/70 (52%), Positives = 54/70 (77%)
Frame = +1
Query: 1 VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ +E GVE
Sbjct: 64 LLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVE 123
Query: 181 RFIHLSYLNA 210
+FIH+S+LNA
Sbjct: 124 KFIHVSHLNA 133
Score = 74.9 bits (176), Expect = 3e-13
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
+K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV
Sbjct: 144 NKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHR--FGPIPLGSLGWKTVKQPV 201
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLGQNATYLPIWLIGF 560
+V DV++GIVNA +D D + + +G + YL L+ +
Sbjct: 202 YVVDVSKGIVNAVKDPDANGKSFAFVGP-SRYLLFHLVKY 240
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 81.8 bits (193), Expect = 2e-15
Identities = 37/70 (52%), Positives = 54/70 (77%)
Frame = +1
Query: 1 VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ +E GVE
Sbjct: 103 LLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVE 162
Query: 181 RFIHLSYLNA 210
+FIH+S+LNA
Sbjct: 163 KFIHVSHLNA 172
Score = 74.9 bits (176), Expect = 3e-13
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
+K +GE VR+ +P A I++ SDI+G EDRFL S + R +PL G TVKQPV
Sbjct: 183 NKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHR--FGPIPLGSLGWKTVKQPV 240
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLGQNATYLPIWLIGF 560
+V DV++GIVNA +D D + + +G + YL L+ +
Sbjct: 241 YVVDVSKGIVNAVKDPDANGKSFAFVGP-SRYLLFHLVKY 279
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,600,068
Number of Sequences: 237096
Number of extensions: 2145120
Number of successful extensions: 7553
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7547
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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