Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10521
(744 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004491-1|AAO42655.1| 327|Drosophila melanogaster GM13757p pro... 112 6e-25
AE014296-3380|AAF51613.1| 416|Drosophila melanogaster CG6020-PA... 109 3e-24
BT029034-1|ABJ16967.1| 324|Drosophila melanogaster IP02858p pro... 101 8e-22
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 29 6.7
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 29 6.7
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 29 6.7
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 29 6.7
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 29 6.7
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 29 6.7
>BT004491-1|AAO42655.1| 327|Drosophila melanogaster GM13757p
protein.
Length = 327
Score = 112 bits (269), Expect = 6e-25
Identities = 55/80 (68%), Positives = 63/80 (78%)
Frame = +1
Query: 1 VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
VLF Y+L D SI AV++SNVVINLVGRD+ETKNFK+ DVHV+G RIARI RE GVE
Sbjct: 24 VLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVE 83
Query: 181 RFIHLSYLNAEEHPKPLVLK 240
RFIHLS LN E +PK L +K
Sbjct: 84 RFIHLSSLNVEANPKDLYVK 103
Score = 101 bits (243), Expect = 8e-22
Identities = 49/87 (56%), Positives = 61/87 (70%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R MPL+ G TVKQPV
Sbjct: 111 SKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPV 170
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLG 521
+VSDVAQ I+NAA+D D+ +Y+ +G
Sbjct: 171 YVSDVAQAIINAAKDPDSAGRIYQAVG 197
Score = 100 bits (240), Expect = 2e-21
Identities = 46/78 (58%), Positives = 58/78 (74%)
Frame = +2
Query: 509 QAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNL 688
QAVGPKRY L++LVDWF++LMRKD+K GY+RYDM++DP LK L + I P P+G L
Sbjct: 194 QAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGL 253
Query: 689 HWEGIEREATSDNVVIGV 742
H IEREA +D V+ GV
Sbjct: 254 HPARIEREAVTDKVLTGV 271
>AE014296-3380|AAF51613.1| 416|Drosophila melanogaster CG6020-PA
protein.
Length = 416
Score = 109 bits (263), Expect = 3e-24
Identities = 54/80 (67%), Positives = 62/80 (77%)
Frame = +1
Query: 1 VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
VLF Y+L D SI AV++SNVVINLVGRD+ETKNFK+ DVHV+G RIARI RE GVE
Sbjct: 113 VLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVE 172
Query: 181 RFIHLSYLNAEEHPKPLVLK 240
R IHLS LN E +PK L +K
Sbjct: 173 RLIHLSSLNVEANPKDLYVK 192
Score = 101 bits (243), Expect = 8e-22
Identities = 49/87 (56%), Positives = 61/87 (70%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R MPL+ G TVKQPV
Sbjct: 200 SKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPV 259
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLG 521
+VSDVAQ I+NAA+D D+ +Y+ +G
Sbjct: 260 YVSDVAQAIINAAKDPDSAGRIYQAVG 286
Score = 100 bits (240), Expect = 2e-21
Identities = 46/78 (58%), Positives = 58/78 (74%)
Frame = +2
Query: 509 QAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNL 688
QAVGPKRY L++LVDWF++LMRKD+K GY+RYDM++DP LK L + I P P+G L
Sbjct: 283 QAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGL 342
Query: 689 HWEGIEREATSDNVVIGV 742
H IEREA +D V+ GV
Sbjct: 343 HPARIEREAVTDKVLTGV 360
>BT029034-1|ABJ16967.1| 324|Drosophila melanogaster IP02858p
protein.
Length = 324
Score = 101 bits (243), Expect = 8e-22
Identities = 49/87 (56%), Positives = 61/87 (70%)
Frame = +3
Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPV 440
SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R MPL+ G TVKQPV
Sbjct: 108 SKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPV 167
Query: 441 FVSDVAQGIVNAARDDDTKCEVYKPLG 521
+VSDVAQ I+NAA+D D+ +Y+ +G
Sbjct: 168 YVSDVAQAIINAAKDPDSAGRIYQAVG 194
Score = 101 bits (242), Expect = 1e-21
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +1
Query: 37 SIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEE 216
SI AV++SNVVINLVGRD+ETKNFK+ DVHV+G RIARI RE GVER IHLS LN E
Sbjct: 33 SIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLSSLNVEA 92
Query: 217 HPKPLVLK 240
+PK L +K
Sbjct: 93 NPKDLYVK 100
Score = 100 bits (240), Expect = 2e-21
Identities = 46/78 (58%), Positives = 58/78 (74%)
Frame = +2
Query: 509 QAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNL 688
QAVGPKRY L++LVDWF++LMRKD+K GY+RYDM++DP LK L + I P P+G L
Sbjct: 191 QAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGL 250
Query: 689 HWEGIEREATSDNVVIGV 742
H IEREA +D V+ GV
Sbjct: 251 HPARIEREAVTDKVLTGV 268
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 336 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 506
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 1202 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 1256
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 336 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 506
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 336 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 506
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 24 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 78
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 336 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 506
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 336 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 506
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 336 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 506
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,004,651
Number of Sequences: 53049
Number of extensions: 657315
Number of successful extensions: 1625
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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