Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10521
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical ...    94   1e-19

>AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.2 protein.
          Length = 431

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/75 (57%), Positives = 55/75 (73%)
 Frame = +1

Query: 1   VLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVE 180
           VL+ P+ L+DEESI KAV+YSNVVINL+G    T  + Y DV+  G RR+ARIC+E GVE
Sbjct: 109 VLYFPFELMDEESIRKAVKYSNVVINLIGTRVPTGKYNYYDVNDTGARRLARICKEMGVE 168

Query: 181 RFIHLSYLNAEEHPK 225
           +F+HLS L A   P+
Sbjct: 169 KFVHLSALGATTQPQ 183



 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = +3

Query: 261 SKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMR-SHSNLMPLYKNGLATVKQP 437
           SK LGE AVREE+P ATIIR S IYG  D F++  V++ R +  + + LYK G  T K P
Sbjct: 196 SKGLGEVAVREEFPEATIIRPSVIYGELDGFIQYYVSRWRKTPLDYVYLYKKGEETYKMP 255

Query: 438 VFVSDVAQGIVNAARDDDTKCEVYKPLGQNATYL 539
           ++V DVA GI +A  D   K   Y+ +G +   L
Sbjct: 256 IWVGDVAAGIQSAVNDPTAKGHTYEFVGPHCYQL 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,594,548
Number of Sequences: 27780
Number of extensions: 342929
Number of successful extensions: 791
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)