Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10521
(744 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 26 0.43
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.99
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.99
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.99
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 24 1.7
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 23 3.0
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 3.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 4.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 7.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.2
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 25.8 bits (54), Expect = 0.43
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 22 LLDEESIAKAVRYSNVVINLVGRDYETKNFKY-NDVHVDGVRRIARICREEGVERFI 189
L+ + +AK Y N+V+ L+ + + +D V GV R + C G +I
Sbjct: 317 LVKDSGVAKDAAYDNIVLKLLTKPRARGCIIFGSDQEVAGVMRAVKRCNATGAFSWI 373
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.99
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 94 YETKNFKYNDVHVDGVRRI 150
+ T +++ ND+H +GV+ I
Sbjct: 283 FRTSDYQQNDIHYEGVQNI 301
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.99
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 94 YETKNFKYNDVHVDGVRRI 150
+ T +++ ND+H +GV+ I
Sbjct: 283 FRTSDYQQNDIHYEGVQNI 301
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.99
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 94 YETKNFKYNDVHVDGVRRI 150
+ T +++ ND+H +GV+ I
Sbjct: 283 FRTSDYQQNDIHYEGVQNI 301
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 302 WVFLSDCTLSQILAYFQADGFFRTR 228
WVF CT + FQA + TR
Sbjct: 487 WVFTLACTAGTLGIIFQAPSLYDTR 511
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 680 GNLHWEGIEREATSD 724
G + WEG+E+E D
Sbjct: 100 GGIFWEGLEKEVGDD 114
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 647 LVNAISPAYPLGNLHWEG--IEREATSDNVVIGV 742
L+ P + L W I REATSD V +G+
Sbjct: 248 LIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGI 281
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 647 LVNAISPAYPLGNLHWEG--IEREATSDNVVIGV 742
L+ P L L W + REAT+D V +G+
Sbjct: 217 LIQVYGPCVLLVVLSWVSFWLNREATADRVSLGI 250
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 302 WVFLSDCTLSQILAYFQADGFFRT 231
W+F C L +L QA + T
Sbjct: 552 WIFTVACVLGTVLIILQAPSLYDT 575
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 7.0
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = +1
Query: 271 WESVQSERNTQLPLLSEHQI 330
WE ++ + + + P S HQ+
Sbjct: 22 WEEIRRQASVEQPSFSVHQV 41
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.2
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -2
Query: 668 LVKWR*PKQLSGAVSGRTSCRSECIHPIFRPSSLVCKTNQPNRQVSSVLAQRLVDF 501
LV WR P Q +G ++ T P+S NQ + S + R DF
Sbjct: 1197 LVSWRPPSQPNGVITQYTVYTK--ADNAEEPTSQKVPPNQLTHEASELDKTRRYDF 1250
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +2
Query: 521 PKRYLLADLVDWFYKLMRKDEKW--GGYIRYDMKYD 622
P YLL D + Y RK+ W G ++ ++ Y+
Sbjct: 977 PTEYLLEDSMKQQYGKRRKEPPWLEGVHVTPELIYE 1012
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,152
Number of Sequences: 438
Number of extensions: 3822
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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