Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10519
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   6.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.9  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 555 CRDLGSCDQPKSDHASTMLMYSIHDPVDL 469
           CRD+  CD+   ++ +T L  S+  PV L
Sbjct: 51  CRDVVRCDKNSDNNGATRLA-SVRCPVGL 78


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 506 VDAWSDFGWSQLP 544
           +D WS F W+ LP
Sbjct: 914 LDQWSSFYWNLLP 926


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 506 VDAWSDFGWSQLP 544
           +D WS F W+ LP
Sbjct: 914 LDQWSSFYWNLLP 926


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 94  KTHNIAQFFPIQLLNISVGTHLS 26
           + H +   FPI L  ISV T L+
Sbjct: 386 RQHAVTAKFPIYLYRISVETKLN 408


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 5   ARRLPQAAKMGAY 43
           ++R+PQ AK GAY
Sbjct: 286 SQRVPQLAKNGAY 298


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 601 LGSDATLFNYVAN 639
           +GSD +L+N+ AN
Sbjct: 160 VGSDGSLYNHTAN 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,063
Number of Sequences: 336
Number of extensions: 3727
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)