Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10519
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   128   1e-29
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   128   1e-29
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    33   0.31 

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  128 bits (308), Expect = 1e-29
 Identities = 58/83 (69%), Positives = 62/83 (74%)
 Frame = +1

Query: 259 KGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVD 438
           KG TYGKPKSHGVNQLKP R LQSIAEE            +SYW+AQD+SYKYFEVIL+D
Sbjct: 77  KGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILID 136

Query: 439 PSHKAIRRDPKINWIVNAVHKHR 507
             H AIRRDPKINWI   VHKHR
Sbjct: 137 THHSAIRRDPKINWICKHVHKHR 159



 Score =  116 bits (278), Expect = 5e-26
 Identities = 50/57 (87%), Positives = 56/57 (98%)
 Frame = +2

Query: 32  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 202
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQ 57



 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = +3

Query: 510 MRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 641
           +RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N   + RKR
Sbjct: 161 LRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  128 bits (308), Expect = 1e-29
 Identities = 58/83 (69%), Positives = 62/83 (74%)
 Frame = +1

Query: 259 KGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVD 438
           KG TYGKPKSHGVNQLKP R LQSIAEE            +SYW+AQD+SYKYFEVIL+D
Sbjct: 77  KGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILID 136

Query: 439 PSHKAIRRDPKINWIVNAVHKHR 507
             H AIRRDPKINWI   VHKHR
Sbjct: 137 THHSAIRRDPKINWICKHVHKHR 159



 Score =  116 bits (278), Expect = 5e-26
 Identities = 50/57 (87%), Positives = 56/57 (98%)
 Frame = +2

Query: 32  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 202
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQ 57



 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = +3

Query: 510 MRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 641
           +RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N   + RKR
Sbjct: 161 LRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 21/81 (25%), Positives = 31/81 (38%)
 Frame = -3

Query: 662 TVLDRCLSFAT*LKSVASEPSCPA*ASLCLRVSMSLAETSGAATSRSQTTHPRCLCTAFT 483
           T   R  +  T  +   + P C    S C   + +   T+   TSR  TT PRC  T  T
Sbjct: 253 TTTPRSTTTTTTRRPTTTTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTST 312

Query: 482 IQLILGSRRMALCDGSTRITS 420
                 + R      ++R T+
Sbjct: 313 CSPTRTTPRSTTTTSTSRPTT 333



 Score = 33.1 bits (72), Expect = 0.41
 Identities = 21/76 (27%), Positives = 28/76 (36%)
 Frame = -3

Query: 710 TGFPICIQN*ANGKSLTVLDRCLSFAT*LKSVASEPSCPA*ASLCLRVSMSLAETSGAAT 531
           T  P C    +     T   R  +  T  +   + P C    S C     +   T+  +T
Sbjct: 269 TTTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRTTPRSTTTTST 328

Query: 530 SRSQTTHPRCLCTAFT 483
           SR  TT PRC  T  T
Sbjct: 329 SRPTTTTPRCTTTPST 344


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,318,956
Number of Sequences: 53049
Number of extensions: 697181
Number of successful extensions: 2104
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2104
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)