Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10517
(518 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 113 2e-24
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 89 4e-17
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 87 2e-16
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 81 1e-14
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 76 2e-14
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 77 3e-13
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 77 3e-13
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 75 1e-12
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 71 2e-11
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 70 4e-11
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 69 5e-11
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 62 6e-09
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 62 1e-08
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 51 1e-05
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 48 1e-04
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 43 0.005
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 42 0.006
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.006
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 41 0.020
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.034
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 39 0.079
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 34 2.2
UniRef50_Q44PW9 Cluster: Putative uncharacterized protein; n=9; ... 33 3.9
UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep... 33 3.9
UniRef50_Q22D17 Cluster: Protein kinase domain containing protei... 33 3.9
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 33 3.9
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 33 5.2
UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 33 5.2
UniRef50_A0AE74 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q4CVN3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 6.8
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 32 6.8
UniRef50_UPI0000499F55 Cluster: hypothetical protein 1.t00113; n... 32 9.0
UniRef50_A7D0Y2 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
UniRef50_O43300 Cluster: Leucine-rich repeat transmembrane neuro... 32 9.0
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 113 bits (272), Expect = 2e-24
Identities = 50/61 (81%), Positives = 57/61 (93%)
Frame = +3
Query: 252 FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 431
F+T+FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRG
Sbjct: 60 FRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119
Query: 432 T 434
T
Sbjct: 120 T 120
Score = 106 bits (254), Expect = 3e-22
Identities = 50/58 (86%), Positives = 51/58 (87%)
Frame = +1
Query: 85 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGLR 258
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFG R
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFR 61
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 89.4 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = +3
Query: 249 RFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 428
+F+T+FGGGKS+G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 429 G 431
G
Sbjct: 121 G 121
Score = 83.8 bits (198), Expect = 2e-15
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 73 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVF 249
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 250 GLR 258
R
Sbjct: 61 KFR 63
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 87.4 bits (207), Expect = 2e-16
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = +3
Query: 231 RCSVRIRFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 410
+C F+T FGGGKSTGF LIYD +D KKFEPKHRL R GL + + +RK KE+KN
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKN 120
Query: 411 RMKKVRG 431
R+KK+RG
Sbjct: 121 RVKKLRG 127
Score = 45.6 bits (103), Expect = 7e-04
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 20/69 (28%)
Frame = +1
Query: 112 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 234
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 235 -VVFVFGLR 258
V +FG R
Sbjct: 61 KCVSIFGFR 69
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 81.4 bits (192), Expect = 1e-14
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +1
Query: 94 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGLR 258
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FG R
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFR 61
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +3
Query: 252 FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 413
F+T+FGGGKSTGFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 60 FRTHFGGGKSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 75.8 bits (178), Expect = 6e-13
Identities = 35/57 (61%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGLR 258
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF R
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFR 67
Score = 65.3 bits (152), Expect(2) = 2e-14
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +3
Query: 228 SRCSVRIRFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLAR 353
S C +F+T+FGGGKSTGF LIYD LD AKK+EPK+RL R
Sbjct: 58 SNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 2e-14
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 354 HGLYEKKRPTRKQRKERKNRMKKVRG 431
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 76.6 bits (180), Expect = 3e-13
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 228 SRCSVRIRFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKER 404
+ C V FKT FGGG+S+GF +IY+ + KKFE ++R R G+ EK T RK RKE
Sbjct: 80 ANCIVLFGFKTAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKET 139
Query: 405 KNRMKKVRGT 434
KNR KKVRGT
Sbjct: 140 KNRRKKVRGT 149
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGLR 258
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FG +
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFK 89
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 76.6 bits (180), Expect = 3e-13
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +3
Query: 252 FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 431
FKT FGGGK+TGF LIYD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 67 FKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
Score = 46.0 bits (104), Expect = 5e-04
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 67 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHP-GKPTVSKTEIREKLAKMYKVTPDV-- 237
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 238 VFVFGLR 258
V +FG +
Sbjct: 62 VSLFGFK 68
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 74.5 bits (175), Expect = 1e-12
Identities = 36/62 (58%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +3
Query: 252 FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVR 428
FKT FGGG++ GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVR
Sbjct: 61 FKTLFGGGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVR 120
Query: 429 GT 434
GT
Sbjct: 121 GT 122
Score = 62.5 bits (145), Expect = 6e-09
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGLR 258
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FG +
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFK 62
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +3
Query: 252 FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 419
F T +GGGK++GFALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 64 FVTKYGGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +1
Query: 91 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV 225
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKV 53
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 69.7 bits (163), Expect = 4e-11
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 255 KTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 434
+T FGGG +TGF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 60 ETKFGGGHTTGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
Score = 49.6 bits (113), Expect = 4e-05
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +1
Query: 91 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGL 255
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FGL
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGL 59
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 69.3 bits (162), Expect = 5e-11
Identities = 32/59 (54%), Positives = 41/59 (69%)
Frame = +3
Query: 255 KTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 431
+T FGG ++TGFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 92 RTTFGGNRTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 85 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGLRQ 261
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+GLR
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 262 T 264
T
Sbjct: 94 T 94
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 62.5 bits (145), Expect = 6e-09
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +1
Query: 85 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 252
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+G
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYG 57
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +3
Query: 252 FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 431
F T +GGGKSTGFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 58 FSTQYGGGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +3
Query: 255 KTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 431
K NFGG K + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 65 KNNFGGFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
Score = 46.0 bits (104), Expect = 5e-04
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 94 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGLR 258
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FGL+
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLK 65
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = -3
Query: 252 TEYEHYIGSNLVHFGELLTDLGLADGWFSWM*NIANHLLARQQSVGHELASANSRC 85
T++++ I LVH +L +D L D F+WM I +HLLA Q+SV H+L+ ++S C
Sbjct: 77 TKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHKLSCSDSHC 132
Score = 44.4 bits (100), Expect = 0.002
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = -1
Query: 467 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDQSE 288
LL T+ F T LHSVL FFTL + LL++ + G V L L ++ VVD ++
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 287 SS*LATSEVCLK-PNTNTTSGVTLYILASFSRISV 186
+ ATS+V K + N G +++ FS S+
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSL 99
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +1
Query: 118 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGLR 258
NRLL+RK++ HPG P SK EIREK++++Y+ D V V L+
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLK 54
Score = 31.9 bits (69), Expect = 9.0
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 255 KTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 434
K +G ++T A IY ++++ E KH +A+ E R+ RK+ + + K+ GT
Sbjct: 54 KNRYGTHRTTLKAKIYSSIEVLSNIEKKHIVAKLTGKEFHVTPRRVRKDERKKRYKIFGT 113
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 42.7 bits (96), Expect = 0.005
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = +1
Query: 94 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGLR 258
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + +R
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIR 57
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 255 KTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 374
++ FG KS G+A Y D EP++ L R G+ EKK
Sbjct: 57 RSYFGSYKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKK 96
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 42.3 bits (95), Expect = 0.006
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 189 RDP*EARQNVQGYSRCSVRIR-FKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLY 365
RD EA +N+ G ++ +R T +G G S IYD+ K FEPKH L R+GL
Sbjct: 37 RDVAEALRNMLGTGGSAIVVRKLVTRYGQGVSEALIHIYDSDVKMKMFEPKHILRRNGLI 96
Query: 366 EKKRPTRKQ 392
+++ +++
Sbjct: 97 QEQEAKKQE 105
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.006
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 142 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 240
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 40.7 bits (91), Expect = 0.020
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Frame = +3
Query: 249 RFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARH------GLYEKKRPTRKQRKERKN 410
R KT FG G+S +Y+ +A+ EP + LAR+ L E+ + R +R+E+K
Sbjct: 58 RIKTEFGRGRSLAEVHVYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKK 117
Query: 411 RMKK 422
R KK
Sbjct: 118 RKKK 121
Score = 32.7 bits (71), Expect = 5.2
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 118 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFV 246
N+LLAR++++ + +H T ++ +RE +AK + VFV
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFV 56
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.034
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 285 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 413
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 38.7 bits (86), Expect = 0.079
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 82 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFV 246
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYV 90
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 290 RFDLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 439
+ +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 110 KITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_Q44PW9 Cluster: Putative uncharacterized protein; n=9;
Chlorobiaceae|Rep: Putative uncharacterized protein -
Chlorobium limicola DSM 245
Length = 139
Score = 33.1 bits (72), Expect = 3.9
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = -1
Query: 242 NTTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNLRVRIVAVPSLILNY 63
NT +G L+ A SV TV F G + + L A L+ + L VAV +L++
Sbjct: 57 NTLAGYLLFEYAIDRESSVFTTVVFGGLAL-RLLLLMA--LVALILIRNFVAVYDFVLSF 113
Query: 62 FQ*FGVYTHVSLLKQEKKKK 3
F + +Y V +L +KK K
Sbjct: 114 FAFYCIYVIVEILGYQKKNK 133
>UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep:
CG8177-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1268
Score = 33.1 bits (72), Expect = 3.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 264 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 422
FGG K +L YD + E K R +RH Y +++ + + E KN++++
Sbjct: 133 FGGKKKIPPSLSYDEQPTDQSHERKRRRSRHQYYRQRKFSHQDSVEPKNKLEE 185
>UniRef50_Q22D17 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 389
Score = 33.1 bits (72), Expect = 3.9
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = -1
Query: 317 QIECVVDQSESS*LATSEVCLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTIC 138
QI C ++QS+ L + + N N + + +LAS S L + +P KT Q+IC
Sbjct: 161 QINCDINQSKFLTLIKANQSNQTNQNYYQSIKVILLASLLA-SYLFSFIYPQIKTIQSIC 219
Query: 137 LRANNLL 117
L NL+
Sbjct: 220 LIHLNLI 226
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 33.1 bits (72), Expect = 3.9
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 118 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFV 246
N+++ RK++ V H G PT S+ +IR+ ++ D+V +
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVI 65
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 32.7 bits (71), Expect = 5.2
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -3
Query: 225 NLVHFGELLTDLGLADGWFSWM*NIANHLLARQQSVGHEL-ASANSRCSFTHFELFSIIR 49
NL HF LLT +SW ++ ++R Q+V EL +SA S T F LFS++
Sbjct: 332 NLQHFS-LLTASNRPSNSYSWNGSLWQRFISRLQTVAAELKSSAIFTSSITTF-LFSLLF 389
Query: 48 RLHARVSAKTR 16
+ R SA +R
Sbjct: 390 QYFRRKSAASR 400
>UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Putative
uncharacterized protein - Alkaliphilus metalliredigens
QYMF
Length = 59
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 324 SWPDRVCRRSKRIQLTCHLRSLS*TEYEHYIGSNL 220
S PD+VC +KRIQ +L+ +Y+ Y+GS L
Sbjct: 21 SEPDKVCICAKRIQFLAEKEALAKEDYKRYLGSVL 55
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 32.7 bits (71), Expect = 5.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 249 RFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARH 356
R ++ FG ++ G+A IY +++ + EP+H + RH
Sbjct: 55 RMESEFGKRETKGYAKIYKSMEHLEDIEPEHMVERH 90
>UniRef50_A0AE74 Cluster: Putative uncharacterized protein; n=1;
Streptomyces ambofaciens ATCC 23877|Rep: Putative
uncharacterized protein - Streptomyces ambofaciens ATCC
23877
Length = 135
Score = 32.3 bits (70), Expect = 6.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 402 VLYAVCAWASSSRTGRGGLTCAWARTSWPDRVCRRSKRIQLTCHLRSL 259
V A+ A A+SSR G L+ WA+ SW RR+ R+ T + R L
Sbjct: 27 VTLAILALAASSRHGMPALSYYWAKMSW-----RRAARVDATSYRRVL 69
>UniRef50_Q4CVN3 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 369
Score = 32.3 bits (70), Expect = 6.8
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = -3
Query: 360 GRGGLTCAWARTSWPDRVCRRSKRIQLTCHLRSLS*TEYEHYIGSN 223
GR G TC + WP+ V RR R+ LRSL TE ++GSN
Sbjct: 61 GRRGPTCMFR---WPEDVERRRTRLTDARPLRSLLVTEVLGFVGSN 103
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -3
Query: 432 YRGPSSFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 316
Y S C L+A C WA +++ +TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 240 VRIRF-KTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHG 359
+ IR+ KT +G G S +YD+ + A FEPK+ + R+G
Sbjct: 68 IYIRYIKTGYGAGLSKVRVHVYDSPERALSFEPKYIIERNG 108
>UniRef50_UPI0000499F55 Cluster: hypothetical protein 1.t00113; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 1.t00113 - Entamoeba histolytica HM-1:IMSS
Length = 676
Score = 31.9 bits (69), Expect = 9.0
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = -3
Query: 147 NHLLARQQSVGHELASANSRCSFTHFELFSIIRRLHARVSAKTREKKKK 1
NH+ Q + +EL + + R F H E ++I RL+ + +++++ K
Sbjct: 283 NHINESLQCISNELETISERFRFCHHECHNLIERLNTLILSQSKQDASK 331
>UniRef50_A7D0Y2 Cluster: Putative uncharacterized protein; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Putative
uncharacterized protein - Halorubrum lacusprofundi ATCC
49239
Length = 259
Score = 31.9 bits (69), Expect = 9.0
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +1
Query: 127 LARKQMVCDVLHPGKPT-----VSKTEIREKLAKMYKVTPDVVFVFGLRQTSEVASQLDS 291
+AR + V D P + T V +T + ++LA+ ++ DVV V G VA QLD+
Sbjct: 194 IARARAVMDAFEPSRATSFGDDVRETHMADRLAE-FRDDGDVVAVVGRHHLDSVAEQLDA 252
Query: 292 L 294
L
Sbjct: 253 L 253
>UniRef50_O43300 Cluster: Leucine-rich repeat transmembrane neuronal
protein 2 precursor; n=18; Euteleostomi|Rep:
Leucine-rich repeat transmembrane neuronal protein 2
precursor - Homo sapiens (Human)
Length = 516
Score = 31.9 bits (69), Expect = 9.0
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = -1
Query: 278 LATSEVCLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNLR 102
L+++++ PNT T + L L SF+++S L F G + QT+ LR+N+L + +R
Sbjct: 116 LSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR 175
Query: 101 V 99
+
Sbjct: 176 L 176
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,525,641
Number of Sequences: 1657284
Number of extensions: 10348451
Number of successful extensions: 30841
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 29406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30719
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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