Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10515
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0207 - 17927753-17927983,17928077-17928178,17928273-179285... 45 5e-05
06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258 31 0.94
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 30 1.6
12_01_0135 + 1042889-1044255,1045368-1045809 30 2.2
11_01_0133 + 1121392-1122731,1123417-1123858 30 2.2
10_08_1013 - 22239396-22239536,22240629-22240715,22240787-22241131 29 2.9
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505... 29 2.9
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 29 2.9
06_01_1204 + 10397131-10398498 29 3.8
04_04_0593 - 26480036-26481438,26481915-26482083 29 3.8
03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798 29 3.8
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 29 5.0
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 29 5.0
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 5.0
03_05_0942 - 29014183-29014332,29014640-29015185 29 5.0
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 28 6.6
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 28 6.6
02_01_0353 + 2545982-2549833 28 6.6
01_04_0038 - 15339047-15339230,15339683-15339741,15340031-153401... 28 6.6
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 28 8.7
04_01_0279 + 3743025-3745169 28 8.7
01_05_0519 - 22897277-22897986,22898126-22898225 28 8.7
>06_03_0207 -
17927753-17927983,17928077-17928178,17928273-17928502,
17929257-17929343,17931263-17931389,17931485-17931628,
17931920-17931985,17932136-17932254,17932437-17932551,
17932626-17932732,17932969-17932983,17933810-17933900,
17934528-17934671,17934750-17934980,17935093-17935248,
17935330-17935483,17935973-17936117,17936241-17936355
Length = 792
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +3
Query: 75 GHVIGKPEPLFVKIEQERLEELRARYAGTQSQRADK 182
GH IGKP PLF +++ E +E R ++AG+Q++R+ K
Sbjct: 521 GHKIGKPSPLFKELKDEEVESFRNKFAGSQAERSSK 556
>06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258
Length = 700
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +2
Query: 38 PREPQAPPVPAAGSRHRETGALIREDRAGE--ARGAESEVRRHAEPE 172
P P PP PAAG + +R D G A A +VR PE
Sbjct: 241 PPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPE 287
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 120 QERLEELRARYAGTQSQRADKKNSKTLDIAELEKSIAE 233
+E +EEL +R + R+D +NSK +I++L+ ++ E
Sbjct: 933 EEHIEELSSRLCLEKKLRSDLENSKATEISKLQTTLHE 970
>12_01_0135 + 1042889-1044255,1045368-1045809
Length = 602
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 662 TSGCHTALSFAEAFNFRTLSPCSAIAISKLATSPAAWFAGGRVSACF 522
TS A FAEA + R +S C + + SPA GRV+A F
Sbjct: 269 TSTQRVAAYFAEAMSARLVSSCLGLYAPLPSPSPAGARVHGRVAAAF 315
>11_01_0133 + 1121392-1122731,1123417-1123858
Length = 593
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -3
Query: 662 TSGCHTALSFAEAFNFRTLSPCSAIAISKLATSPAAWFAGGRVSACF 522
TS A FAEA + R +S C + SPAA GRV+A F
Sbjct: 260 TSTQRVAAYFAEAMSARLVSSCLGLYAPLPNPSPAAARLHGRVAAAF 306
>10_08_1013 -
22239396-22239536,22240629-22240715,22240787-22241131
Length = 190
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 11 RGRRKAPTEPREPQAPPVPA 70
RGRR AP P P PP PA
Sbjct: 7 RGRRSAPAPPPPPTPPPPPA 26
>08_02_0743 -
20647440-20647927,20647997-20648426,20650127-20650570,
20650639-20650692
Length = 471
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 8 QRGRRKAPTEPREPQAPPVPAAGSRHRETG 97
+RGR + P +PR+P APP P S R G
Sbjct: 88 KRGRGRPP-KPRDPNAPPPPPKPSSPRPRG 116
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 538 RPPANQAAGDVASLEIAIAEQGDKVRKLKASAKDKAVWQPEVNVLLDLK 684
RP N GD E+ + E+G RK+ + + + +PE N DLK
Sbjct: 349 RPKVNPF-GDAKPREVVLQEKGKDWRKIDLELEHRRIDRPETNEEKDLK 396
>06_01_1204 + 10397131-10398498
Length = 455
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 14 GRRKAPTEPREPQAPPVPAAGSRHRETGALIREDRAG 124
G RKA RE A V A GS +R L+R R G
Sbjct: 412 GVRKAAASVREAAARAVAAGGSSYRSLAELVRRCRDG 448
>04_04_0593 - 26480036-26481438,26481915-26482083
Length = 523
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 350 ETRPPANQAAGDVASLEKAIAEQGDAVRKLKST-TKDKSVW 469
E R Q + A +E+ IAE +A LKST ++DK+VW
Sbjct: 234 EARAVLLQISESEAEVEERIAEIEEAANLLKSTKSEDKAVW 274
>03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798
Length = 289
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 20 RKAPTEPREPQAPPVPAAGSRHRETGALIREDRAGEARGAESEVRRHAEPEGR*EK 187
RK P P+E PP PA R G R+ +A ++ R+ EP+ R K
Sbjct: 39 RKNPN-PKEEAPPPPPANNKRLNPQGGSNRKKKADAGTPSKKPKRQPPEPKPRKHK 93
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 17 RRKAPTEPREPQAPPVPAAGSRHRETGALIREDRAGEARGAESEVRR 157
RR+ PT P P +PP+ S+ + +R +AR + E R
Sbjct: 575 RRRRPTPPLTPASPPLERVASKAGGSRGWLRRPPPEQARASTVEAGR 621
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 17 RRKAPTEPREPQAPPVPAAGSRHRETGALIREDRAGEARGA 139
RR E R PP +G E+ A++ E R GEA A
Sbjct: 434 RRDHRPESRAEPTPPAQPSGKPDGESAAVVSEARNGEATAA 474
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +2
Query: 17 RRKAPTEPREPQAPPVPAAGS-----RHRETGALIREDRA-GEARGAESEVRRHAEPE 172
R +AP+ PR P PP P + R G +D + G+ GA S R H PE
Sbjct: 43 RHRAPSPPRPPPPPPPPTQPAPPPPPPARSGGGGGSDDGSDGDDEGAASSSRPHLVPE 100
>03_05_0942 - 29014183-29014332,29014640-29015185
Length = 231
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 20 RKAPTEPREPQAPPVPAAGSRHR 88
+K T P PQAPP P A +HR
Sbjct: 109 QKKHTPPAPPQAPPQPQAQRQHR 131
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +2
Query: 2 TTQRGRRKAPTEPREPQA-PPVPAAGSRHRETGALIREDRAGEARGAE------SEVRRH 160
T + R AP++ R PQA PP P ++ + +D + E SEVRR
Sbjct: 114 TPPQAPRPAPSKSRAPQAPPPAPTRATKKAKVDTAKNKDPGYDCTQEELDAYVSSEVRRQ 173
Query: 161 AEPEGR*EKL 190
+P +K+
Sbjct: 174 LKPRSPEKKI 183
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 673 AIHLLQAATRPCLLLRLSISGLYHPAQQ*LSLSW 572
AI ++ A P ++L + GL+HPA++ + W
Sbjct: 1087 AIEGMRVALGPAVILNYCLQGLFHPARKVREVYW 1120
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 673 AIHLLQAATRPCLLLRLSISGLYHPAQQ*LSLSW 572
AI ++ A P ++L + GL+HPA++ + W
Sbjct: 1212 AIEGMRVALGPAVILNYCLQGLFHPARKVREVYW 1245
>01_04_0038 -
15339047-15339230,15339683-15339741,15340031-15340160,
15340248-15340498,15340632-15341225,15342050-15342511
Length = 559
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +1
Query: 520 QKQAETRPPANQAAGDVASLEIAIAEQGDKVRKLKASAKDKAVWQPEVNVLLDLKNVSKH 699
+K+ + P +++ D+ + + + E+GD V +LKA+ K V L K
Sbjct: 211 EKELKENPAPSES--DIEAARVVVKEKGDAVAQLKAAKASKQEITAAVAELNKAKENVSR 268
Query: 700 CKSRNKL 720
+ R+KL
Sbjct: 269 LEERSKL 275
>06_03_0921 +
25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 710 LDLQCLETFFRSSNTFTSGCHTALS-FAEAFNFRTLSPCSAIAIS 579
L+ C+E +++GC TALS F A ++RT+ P AI +S
Sbjct: 180 LEFICVENGIVLVMPYSTGCKTALSNFEAALDYRTV-PDPAIMVS 223
>04_01_0279 + 3743025-3745169
Length = 714
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 642 LVFC*GFQFPDFITLLSNSYL*AGHIASGLVRWWSRFSLL 523
LV +Q DF+ + +L GH LV +W+ F LL
Sbjct: 46 LVVWPAYQLADFVATFTIGHLSVGHERRRLVAFWAPFLLL 85
>01_05_0519 - 22897277-22897986,22898126-22898225
Length = 269
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 11 RGRRKAPTEPREPQA-PPVPAAGSRHRETGALIREDRAGEARGAESEV 151
R +++ P + P A PP PAA RH E E +A +R A+ +
Sbjct: 147 REKKEEPPKATAPAAAPPQPAARERHDEEEKARAEHKARLSREADRRI 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,780,146
Number of Sequences: 37544
Number of extensions: 291885
Number of successful extensions: 1399
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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