Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10515
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.5  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   7.3  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.7  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 576 AGHIASGLVRWWSR 535
           AGH ASG VRW  R
Sbjct: 902 AGHQASGYVRWAHR 915



 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 394 AGHIASGLVRWWSR 353
           AGH ASG VRW  R
Sbjct: 902 AGHQASGYVRWAHR 915


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 35  EPREPQAPPVP 67
           +PR+P  PPVP
Sbjct: 89  QPRQPMGPPVP 99


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 35   EPREPQAPPVPAAGSRHRETGALIREDRA 121
            E R    PP P A  R  +  A +RE +A
Sbjct: 1124 EERRAGLPPTPPASPRTAQRRAALRERQA 1152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,424
Number of Sequences: 2352
Number of extensions: 9095
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)