Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10514
(662 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA... 29 4.3
BT001687-1|AAN71442.1| 852|Drosophila melanogaster RE58243p pro... 29 5.6
AE014134-593|AAS64619.1| 824|Drosophila melanogaster CG3304-PB,... 29 5.6
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,... 29 5.6
AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,... 29 5.6
U89385-1|AAB49892.1| 534|Drosophila melanogaster LIM homeobox p... 28 9.9
BT029915-1|ABM92789.1| 520|Drosophila melanogaster FI01025p pro... 28 9.9
BT003469-1|AAO39472.1| 523|Drosophila melanogaster RE70568p pro... 28 9.9
AY094883-1|AAM11236.1| 443|Drosophila melanogaster RE51913p pro... 28 9.9
AF145674-1|AAD38649.1| 465|Drosophila melanogaster tailup protein. 28 9.9
AE014296-669|AAF47779.2| 942|Drosophila melanogaster CG14973-PA... 28 9.9
AE014135-28|AAN06558.1| 443|Drosophila melanogaster CG32006-PA ... 28 9.9
AE014134-3038|AAF53756.1| 440|Drosophila melanogaster CG10699-P... 28 9.9
AE014134-3037|AAF53758.2| 520|Drosophila melanogaster CG10699-P... 28 9.9
AE014134-2994|AAN11018.1| 465|Drosophila melanogaster CG10619-P... 28 9.9
AE014134-2993|AAF53720.1| 534|Drosophila melanogaster CG10619-P... 28 9.9
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein. 28 9.9
>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
protein.
Length = 1995
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -1
Query: 365 EHIQIQPVH*PCNTSDDTTNNKYNTIKNRQNTNESRVQVGS 243
EH+ +H PC ++ TNN N N N + ++ S
Sbjct: 748 EHMNSHAMHFPCLKANAVTNNNNNNNNTNNNNNNNNNELNS 788
>BT001687-1|AAN71442.1| 852|Drosophila melanogaster RE58243p
protein.
Length = 852
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 566 PQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
PQS N++ S GGV P KY +N + S
Sbjct: 542 PQSGNSSASSGGGVRASAPRKSKTKYFFNSSKS 574
>AE014134-593|AAS64619.1| 824|Drosophila melanogaster CG3304-PB,
isoform B protein.
Length = 824
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 566 PQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
PQS N++ S GGV P KY +N + S
Sbjct: 519 PQSGNSSASSGGGVRASAPRKSKTKYFFNSSKS 551
>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
isoform C protein.
Length = 1205
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 566 PQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
PQS N++ S GGV P KY +N + S
Sbjct: 519 PQSGNSSASSGGGVRASAPRKSKTKYFFNSSKS 551
>AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,
isoform A protein.
Length = 1104
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 566 PQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
PQS N++ S GGV P KY +N + S
Sbjct: 519 PQSGNSSASSGGGVRASAPRKSKTKYFFNSSKS 551
>U89385-1|AAB49892.1| 534|Drosophila melanogaster LIM homeobox
protein protein.
Length = 534
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 605 TNNSYVRRNWNNQPQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
+NN+ N NN S+N + G + G +S +HK I + PS
Sbjct: 189 SNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRDKRPS 234
>BT029915-1|ABM92789.1| 520|Drosophila melanogaster FI01025p
protein.
Length = 520
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 608 STNNSYVRRNWNNQPQSSNTNDKSKGG 528
STN + N NN SS+ N+ S GG
Sbjct: 474 STNTTSANNNANNNSSSSHNNNNSSGG 500
>BT003469-1|AAO39472.1| 523|Drosophila melanogaster RE70568p
protein.
Length = 523
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 608 STNNSYVRRNWNNQPQSSNTNDKSKGG 528
STN + N NN SS+ N+ S GG
Sbjct: 477 STNTTSANNNANNNSSSSHNNNNSSGG 503
>AY094883-1|AAM11236.1| 443|Drosophila melanogaster RE51913p
protein.
Length = 443
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 317 DTTNNKYNTIKNRQNTNESRVQVGSVV---NIIISRANKETNLKWRRRSCALTLNY 159
DTTN + KN N ++ V+ + I+ N T++ W C +T+NY
Sbjct: 345 DTTNTPISAEKNFCTFNNFYSEMTPVLASNSNIVEDQNVSTDVSWPSHPCNITINY 400
>AF145674-1|AAD38649.1| 465|Drosophila melanogaster tailup protein.
Length = 465
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 605 TNNSYVRRNWNNQPQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
+NN+ N NN S+N + G + G +S +HK I + PS
Sbjct: 189 SNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRDKRPS 234
>AE014296-669|AAF47779.2| 942|Drosophila melanogaster CG14973-PA
protein.
Length = 942
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 326 TSDDTTNNKYNTIKNRQNTNESRVQVGSVVNIIISRANKETN 201
T+++T+NNK +T+ N N S + N IS N TN
Sbjct: 172 TNNNTSNNK-DTLNNNNVNNNSNNNCNNQTNTSISNNNHATN 212
>AE014135-28|AAN06558.1| 443|Drosophila melanogaster CG32006-PA
protein.
Length = 443
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 317 DTTNNKYNTIKNRQNTNESRVQVGSVV---NIIISRANKETNLKWRRRSCALTLNY 159
DTTN + KN N ++ V+ + I+ N T++ W C +T+NY
Sbjct: 345 DTTNTPISAEKNFCTFNNFYSEMTPVLASNSNIVEDQNVSTDVSWPSHPCNITINY 400
>AE014134-3038|AAF53756.1| 440|Drosophila melanogaster CG10699-PA,
isoform A protein.
Length = 440
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 608 STNNSYVRRNWNNQPQSSNTNDKSKGG 528
STN + N NN SS+ N+ S GG
Sbjct: 394 STNTTSANNNANNNSSSSHNNNNSSGG 420
>AE014134-3037|AAF53758.2| 520|Drosophila melanogaster CG10699-PB,
isoform B protein.
Length = 520
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 608 STNNSYVRRNWNNQPQSSNTNDKSKGG 528
STN + N NN SS+ N+ S GG
Sbjct: 474 STNTTSANNNANNNSSSSHNNNNSSGG 500
>AE014134-2994|AAN11018.1| 465|Drosophila melanogaster CG10619-PB,
isoform B protein.
Length = 465
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 605 TNNSYVRRNWNNQPQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
+NN+ N NN S+N + G + G +S +HK I + PS
Sbjct: 189 SNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRDKRPS 234
>AE014134-2993|AAF53720.1| 534|Drosophila melanogaster CG10619-PA,
isoform A protein.
Length = 534
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 605 TNNSYVRRNWNNQPQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
+NN+ N NN S+N + G + G +S +HK I + PS
Sbjct: 189 SNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRDKRPS 234
>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
Length = 1990
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 365 EHIQIQPVH*PCNTSDDTTNNKYNTIKNRQNTNE 264
EH+ +H PC ++ TNN N N N NE
Sbjct: 748 EHMNSHAMHFPCLKANAVTNNNNNN-NNTNNNNE 780
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,742,372
Number of Sequences: 53049
Number of extensions: 534039
Number of successful extensions: 1704
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -