Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10513
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3885|AAF56538.1|  613|Drosophila melanogaster CG14540-P...    29   4.7  
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    29   4.7  
BT001687-1|AAN71442.1|  852|Drosophila melanogaster RE58243p pro...    29   6.2  
AE014134-593|AAS64619.1|  824|Drosophila melanogaster CG3304-PB,...    29   6.2  
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,...    29   6.2  
AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,...    29   6.2  

>AE014297-3885|AAF56538.1|  613|Drosophila melanogaster CG14540-PA
           protein.
          Length = 613

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -3

Query: 210 RNESKMAAAIMRSHSKLLLSLVAHSAYCMQKKLSVLTGK*YGLSQTRKILHSD--APEIV 37
           RN+SKM  +  + H++ L++  A+ + C  ++  VL  +     Q+  +  SD    E++
Sbjct: 430 RNQSKMPISAKKDHNESLMNSSAYRSICKAQQ-PVLAAQKSSSEQSLVVKSSDVGVQEVL 488

Query: 36  YNVIKYFEEEKN 1
            N+ +Y  + K+
Sbjct: 489 DNIQRYCNQVKD 500


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
           protein.
          Length = 1995

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 365 EHIQIQPVH*PCNTSDDTTNNKYNTIKNRQNTNESRVQVGS 243
           EH+    +H PC  ++  TNN  N      N N +  ++ S
Sbjct: 748 EHMNSHAMHFPCLKANAVTNNNNNNNNTNNNNNNNNNELNS 788


>BT001687-1|AAN71442.1|  852|Drosophila melanogaster RE58243p
           protein.
          Length = 852

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 566 PQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
           PQS N++  S GGV    P     KY +N + S
Sbjct: 542 PQSGNSSASSGGGVRASAPRKSKTKYFFNSSKS 574


>AE014134-593|AAS64619.1|  824|Drosophila melanogaster CG3304-PB,
           isoform B protein.
          Length = 824

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 566 PQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
           PQS N++  S GGV    P     KY +N + S
Sbjct: 519 PQSGNSSASSGGGVRASAPRKSKTKYFFNSSKS 551


>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
           isoform C protein.
          Length = 1205

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 566 PQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
           PQS N++  S GGV    P     KY +N + S
Sbjct: 519 PQSGNSSASSGGGVRASAPRKSKTKYFFNSSKS 551


>AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,
           isoform A protein.
          Length = 1104

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 566 PQSSNTNDKSKGGVHVRGPDSFTHKYIYNIAPS 468
           PQS N++  S GGV    P     KY +N + S
Sbjct: 519 PQSGNSSASSGGGVRASAPRKSKTKYFFNSSKS 551


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,404,769
Number of Sequences: 53049
Number of extensions: 543691
Number of successful extensions: 1703
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1673
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)