Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10512
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    27   0.58 
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   2.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   2.3  
AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical prote...    24   4.1  
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    23   7.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   7.2  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   7.2  

>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 280 WGITLQEAEIAAKELKIPFFTNKIDDVLLKKNVS 381
           WGI   E  I    + +P F   IDD L ++N++
Sbjct: 179 WGIGCGEDGIPGVYVNVPMFRGWIDDHLRQRNIT 212


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +1

Query: 262 FSVEAIWGITLQEAEIAAKELKIPFFTNKIDDVLLKKNVSLVFI 393
           F +  +  +T  E ++    ++     N  D+V  K+N++LV+I
Sbjct: 428 FEISYVPDLTTAELQVGRFGIRETLLDNVKDEVYAKENLALVYI 471


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +1

Query: 262 FSVEAIWGITLQEAEIAAKELKIPFFTNKIDDVLLKKNVSLVFI 393
           F +  +  +T  E ++    ++     N  D+V  K+N++LV+I
Sbjct: 428 FEISYVPDLTTAELQVGRFGIRETLLDNVKDEVYAKENLALVYI 471


>AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical protein
           protein.
          Length = 86

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 528 TLISIVNHSLRFLPAFTHLRQCIQEGYLGDPEELTLIDVRVQ 653
           T++SI +   + LP  TH     ++GY   P+E   + ++V+
Sbjct: 15  TIVSIADGPTQKLPCVTHSNDDYEDGY--KPQEQRKLAMKVK 54


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 351 NFVCE--ERNFKFFCGYLCFLQSYTPYCFNRKSFPFKKGTRTLAIAP 217
           +FV E  E +F++   +  F+Q+++   +NR+  P  + T   +  P
Sbjct: 106 DFVVESVEASFRYAMDFSYFIQNFSAVPYNREVKPGHEATVAYSFLP 152


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -3

Query: 545 NNRNERWIILCC---RTIFNASAWHSPAGLSQTTCFPI 441
           NNR+ R +++     R  FN ++W S A   Q    P+
Sbjct: 566 NNRDRRCLMVVALDVRNAFNTASWQSIAEALQAKGVPV 603


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 582 LRQCIQEGYLGDPEELTLIDVRVQMGPLIGDSYNWLCDDT 701
           L Q  Q  ++G     +++DV      L+GD+   +CD+T
Sbjct: 162 LNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDET 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,652
Number of Sequences: 2352
Number of extensions: 15173
Number of successful extensions: 55
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)