Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10511
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20790.1 68416.m02629 oxidoreductase family protein weak simi... 37 0.012
At1g34200.1 68414.m04243 oxidoreductase family protein similar t... 32 0.46
At4g09670.1 68417.m01588 oxidoreductase family protein similar t... 31 0.81
At2g40280.1 68415.m04958 dehydration-responsive family protein s... 31 0.81
At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to vil... 30 1.4
At1g19370.1 68414.m02410 expressed protein 30 1.9
At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase fa... 29 4.3
At2g35880.1 68415.m04405 expressed protein 27 9.9
>At3g20790.1 68416.m02629 oxidoreductase family protein weak
similarity to SP|Q07982 Glucose--fructose oxidoreductase
precursor (EC 1.1.99.28) {Zymomonas mobilis}; contains
Pfam profiles PF01408: Oxidoreductase family NAD-binding
Rossmann fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 355
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Frame = +1
Query: 268 VEAIWGITLQEA----EIAAK---ELKIPFFTNKIDDVLLKKNVSLVFIVCAPNLHAQIS 426
++AIW T + A EIA K E+K + +++++ ++ V +V A ++S
Sbjct: 35 LKAIWSRTEESAKGAVEIARKHFPEVKCKWGDEGLNEIIQDSSIVGVAVVVAAETMVELS 94
Query: 427 VKALGIGKHVVCDKPAGLCQAE 492
+K L GKHV+ +KPA +E
Sbjct: 95 LKMLKAGKHVLQEKPAAASISE 116
>At1g34200.1 68414.m04243 oxidoreductase family protein similar to
AX110P [Daucus carota] GI:285739; contains Pfam profiles
PF01408: Oxidoreductase family NAD-binding Rossmann
fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 352
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 289 TLQEAEIAAKELKIPFFT---NKIDDVLLKKNVSLVFIVCAPNLHAQISVKALGIGKHVV 459
+++EA+ AK P T + + +L +V V+ LH + + A GKH++
Sbjct: 41 SIEEAKSFAKSNNFPPNTKLHSSYESLLEDPDVDAVYFPIPTRLHVEWATLAAIKGKHIL 100
Query: 460 CDKPAGLCQAE 492
DKP L AE
Sbjct: 101 LDKPVALNVAE 111
>At4g09670.1 68417.m01588 oxidoreductase family protein similar to
AX110P [Daucus carota] GI:285739; contains Pfam profiles
PF01408: Oxidoreductase family NAD-binding Rossmann
fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 362
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +1
Query: 352 DDVLLKKNVSLVFIVCAPNLHAQISVKALGIGKHVVCDKPAGLCQAEALKMV 507
+ +L + +++ +LH + ++KA GKH++ +KP + E K+V
Sbjct: 64 ESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIV 115
>At2g40280.1 68415.m04958 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 589
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 258 FPFKKGTRTLAIAPVPKTPIPGNIVLTLFSLTFNKVRLQT 139
FPF + T P+PK+PIP IV T K++L T
Sbjct: 32 FPFPSLSTTDYYTPIPKSPIPHRIVDVSSDQTPQKMKLNT 71
>At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to villin
1 (VLN1) [Arabidopsis thaliana] GI:3415113
Length = 909
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 325 KIPFFTNKI--DDVLLKKNVSLVFIVCAPNLHAQISVKALGIGKHVVCDKPAGLCQAEAL 498
++PF + + DDV + S VF+ N Q KA+ + +++ +K G C+ +
Sbjct: 153 EVPFLRSSLNHDDVFILDTASKVFLFAGCNSSTQEKAKAMEVVEYIKDNKHDGRCEVATI 212
Query: 499 K 501
+
Sbjct: 213 E 213
>At1g19370.1 68414.m02410 expressed protein
Length = 605
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 459 NNMFSYTKCFDRYLSMKIWG-TNYEN*THILLEKDVVNFVCEERNFKFF 316
N+ + T FD K +G T+ H+LL D++NF C R+ K F
Sbjct: 318 NHSLARTYVFDAAERSKAYGFTSEGEIIHVLLHGDIMNFKCRVRSKKKF 366
>At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase
family protein simlar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 585
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 545 NNRNERWIILCCRTIFNASAWHSPAGLSQTTCFPIPSALTDI*A*RFGAQTMKTKLTFFL 366
N ++W+ L +T+ N +G + P+P A D F T + TFF
Sbjct: 114 NGPAQKWLSLIRKTLNNRPGTSGTSGYHTPSPIPVPMAELDA---DFSGSTRQKNSTFFH 170
Query: 365 RRT 357
RR+
Sbjct: 171 RRS 173
>At2g35880.1 68415.m04405 expressed protein
Length = 432
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 479 SPAGLSQTTCFPIPSALTDI*A*RFGAQTMKTKL 378
SP +SQ++ FP A TDI A T KT L
Sbjct: 89 SPRFMSQSSSFPTKGAYTDITRKSIDATTSKTSL 122
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,859,842
Number of Sequences: 28952
Number of extensions: 331960
Number of successful extensions: 798
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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