Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10510
         (804 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0799 + 25334460-25334994,25335060-25335236,25335325-253354...    30   1.9  
04_04_0477 + 25517060-25517152,25517263-25517382,25518203-255185...    30   2.5  
11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617     28   7.6  
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015...    28   7.6  
06_02_0321 - 14355058-14355681                                         28   10.0 

>01_05_0799 +
           25334460-25334994,25335060-25335236,25335325-25335447,
           25335559-25335624,25335717-25336685,25336791-25336912,
           25337156-25337549,25337888-25338009,25338253-25338646,
           25338983-25339104,25339348-25339830,25340291-25340960,
           25341713-25342224,25342484-25342540
          Length = 1581

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 53  DEEVERRARHERDRQLLHQNIVSV*NSQS*RHHVLEQEQSFETV 184
           +EE  R+ R  R R+    NIVS  NS+S  H+V     ++ TV
Sbjct: 146 NEERNRKQREYRARKKAESNIVSGSNSESTNHNVSPYGTTYSTV 189


>04_04_0477 +
           25517060-25517152,25517263-25517382,25518203-25518506,
           25518944-25519305,25519401-25519575,25520510-25520574,
           25520725-25520790,25521275-25521350,25521813-25521922
          Length = 456

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 23/93 (24%), Positives = 35/93 (37%)
 Frame = -2

Query: 410 ESSPYIPLAPNSLRDSPLPEDSHPAAAGSRLRASTSPRNCSVHCV*RSKGDCLSVPEIRE 231
           E +P  P + +S +D+PL    HP+           P   +   V R+KG   S   I  
Sbjct: 249 ELTPSFPSSTDSKQDAPLGPIVHPSVTTPEEEPMGEPAKQTYASVLRTKGH-PSHQAIHS 307

Query: 230 FPANEDLVQARHHQLEQFRRTVLAPKRDVVNFD 132
            P N+    +   QL       + P  +  N D
Sbjct: 308 IPLNKATASSVESQLNGHMTKQVQPVHEKANLD 340


>11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617
          Length = 772

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 257 CLSVPEIREFPANEDLVQ-ARHHQLEQFRR 171
           CL  PEIR   A E   + ARH +LE++RR
Sbjct: 684 CLLAPEIRNVVACEGAERVARHERLERWRR 713


>04_03_0742 +
           19200045-19200053,19200158-19200437,19201331-19201545,
           19201705-19201792,19202277-19202842
          Length = 385

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 401 PYIPLAPNSLRDSPLPEDSHPAAAGSRLRASTSPRNCSV 285
           PY P  P   + S  P  SHP+   S++ +  +P  CSV
Sbjct: 346 PYPPSYPPPYQPSYPPYPSHPSHHPSQIFSDENPNACSV 384


>06_02_0321 - 14355058-14355681
          Length = 207

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 398 YIPLAPNSLRDSPLPEDSHPA 336
           Y+PLAPN + +SP+P   + A
Sbjct: 166 YVPLAPNFVSNSPIPSSHYIA 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,558,565
Number of Sequences: 37544
Number of extensions: 416341
Number of successful extensions: 1026
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)