Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10510
         (804 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82282-9|CAB05281.2|  361|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z35602-2|CAA84671.3|  824|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC084158-29|AAL27264.2|  666|Caenorhabditis elegans Yeast smf (d...    29   3.9  
Z92822-9|CAL49448.1|  576|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z82094-5|CAL49446.1|  576|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    28   6.8  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      28   6.8  

>Z82282-9|CAB05281.2|  361|Caenorhabditis elegans Hypothetical
           protein T07G12.12 protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 242 EIREFPANEDLVQARHHQLEQFRRTVLAPKRDVVNFDYFKQKQCFDEV 99
           E +  P N+D++      ++  R TV+ P R    FDY  +    D++
Sbjct: 171 EYQSLPPNDDVIMNETELMDVDRTTVMTPLRSPTFFDYHNESGDEDQL 218


>Z35602-2|CAA84671.3|  824|Caenorhabditis elegans Hypothetical
           protein R13G10.2 protein.
          Length = 824

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 550 IDIYNVNAPLTLRCKF*GLTYSYKG--CPALQAETRYCFTAE 669
           I + N+N P+TL C+  G+ Y      CP +    R CFT E
Sbjct: 406 IIVGNINNPITLLCEQIGIKYRNSNFFCPLIDENGR-CFTLE 446


>AC084158-29|AAL27264.2|  666|Caenorhabditis elegans Yeast smf
           (divalent cation transporter)homolog protein 3 protein.
          Length = 666

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 466 YVSFLFY--FYCVDGWRAHSPPGVKWLLEPIDIYNVNAP 576
           Y+ F+ Y  +YC+      SP   KWL EPI  ++ +AP
Sbjct: 606 YIIFIAYLTYYCLVAMEFISPIQTKWLAEPI-YHDFDAP 643


>Z92822-9|CAL49448.1|  576|Caenorhabditis elegans Hypothetical
           protein ZK520.3b protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 6   RLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 110
           RLL+   N+   A+R++++ R  +G   +A +F+K
Sbjct: 167 RLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 201


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical protein
            ZK520.3a protein.
          Length = 1383

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 6    RLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 110
            RLL+   N+   A+R++++ R  +G   +A +F+K
Sbjct: 974  RLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008


>Z82094-5|CAL49446.1|  576|Caenorhabditis elegans Hypothetical
           protein ZK520.3b protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 6   RLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 110
           RLL+   N+   A+R++++ R  +G   +A +F+K
Sbjct: 167 RLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 201


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical protein
            ZK520.3a protein.
          Length = 1383

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 6    RLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 110
            RLL+   N+   A+R++++ R  +G   +A +F+K
Sbjct: 974  RLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 6    RLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 110
            RLL+   N+   A+R++++ R  +G   +A +F+K
Sbjct: 974  RLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,370,902
Number of Sequences: 27780
Number of extensions: 353367
Number of successful extensions: 920
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)