Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10508
(498 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 124 1e-27
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 101 1e-20
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 100 2e-20
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 95 1e-18
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 81 1e-14
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 78 1e-13
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 78 1e-13
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 70 3e-11
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 66 5e-10
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 64 1e-09
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 62 7e-09
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 58 8e-08
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 56 4e-07
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 56 6e-07
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 53 4e-06
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 48 2e-04
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 44 0.003
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 44 0.003
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.006
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 40 0.041
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.17
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 37 0.29
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 36 0.51
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 36 0.51
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 35 1.2
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 34 1.5
UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 33 2.7
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 33 2.7
UniRef50_Q22D17 Cluster: Protein kinase domain containing protei... 33 3.6
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 33 3.6
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 6.2
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 32 6.2
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 124 bits (298), Expect = 1e-27
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +3
Query: 54 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 233
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 234 FGGGKST 254
FGGGK+T
Sbjct: 64 FGGGKTT 70
Score = 91.5 bits (217), Expect = 1e-17
Identities = 41/49 (83%), Positives = 45/49 (91%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 403
F +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 72 FGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 101 bits (241), Expect = 1e-20
Identities = 47/72 (65%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVF 218
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 219 GFKTNFGGGKST 254
F+T+FGGGKS+
Sbjct: 61 KFRTHFGGGKSS 72
Score = 66.9 bits (156), Expect = 2e-10
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 400
+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+RG
Sbjct: 74 YGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRG 121
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 100 bits (239), Expect = 2e-20
Identities = 44/64 (68%), Positives = 55/64 (85%)
Frame = +3
Query: 63 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 242
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 243 GKST 254
GKST
Sbjct: 67 GKST 70
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 382
FAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 72 FALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 94.7 bits (225), Expect = 1e-18
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 236
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 237 GGGKST 254
GGGKST
Sbjct: 71 GGGKST 76
Score = 39.5 bits (88), Expect(2) = 6e-07
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 197 SRCSVRIRFQDKLRRWQVN*FALIYDTLDLAKKFEPKHRLAR 322
S C +F+ + F LIYD LD AKK+EPK+RL R
Sbjct: 58 SNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 6e-07
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 323 HGLYEKKRPTRKQRKERKNRMKKVRG 400
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 81.0 bits (191), Expect = 1e-14
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +3
Query: 54 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 233
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 234 FGGGKST 254
+GGGKST
Sbjct: 62 YGGGKST 68
Score = 39.9 bits (89), Expect = 0.031
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 400
FAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 70 FALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 236
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 237 GGGKST 254
GGG+S+
Sbjct: 93 GGGRSS 98
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 197 SRCSVRIRFQDKLRRWQVN*FALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKER 373
+ C V F+ + + F +IY+ + KKFE ++R R G+ EK T RK RKE
Sbjct: 80 ANCIVLFGFKTAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKET 139
Query: 374 KNRMKKVRGT 403
KNR KKVRGT
Sbjct: 140 KNRRKKVRGT 149
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 77.8 bits (183), Expect = 1e-13
Identities = 34/65 (52%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 236
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 237 GGGKS 251
GGG++
Sbjct: 66 GGGRT 70
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 403
F LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 73 FGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 70.1 bits (164), Expect = 3e-11
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 236
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 237 GGGKST 254
GGGK++
Sbjct: 69 GGGKTS 74
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 388
FALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 76 FALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 65.7 bits (153), Expect = 5e-10
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = +3
Query: 36 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHP-GKPTVSKTEIREKLAKMYKVTPDV-- 206
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 207 VFVFGFKTNFGGGKST 254
V +FGFKT FGGGK+T
Sbjct: 62 VSLFGFKTKFGGGKTT 77
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +2
Query: 221 FQDKLRRWQVN*FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 400
F+ K + F LIYD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 67 FKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 64.5 bits (150), Expect = 1e-09
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 400
F LIYD +D KKFEPKHRL R GL + + +RK KE+KNR+KK+RG
Sbjct: 80 FGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKNRVKKLRG 127
Score = 63.3 bits (147), Expect = 3e-09
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 20/78 (25%)
Frame = +3
Query: 81 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 203
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 204 -VVFVFGFKTNFGGGKST 254
V +FGF+T FGGGKST
Sbjct: 61 KCVSIFGFRTAFGGGKST 78
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 62.1 bits (144), Expect = 7e-09
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +3
Query: 60 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 239
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 240 GGKST 254
GG +T
Sbjct: 65 GGHTT 69
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 403
F +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 71 FGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 58.4 bits (135), Expect = 8e-08
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = -2
Query: 281 RVCRRSKRIS*LATSEVCLETEYEHYIGSNLVHFGELLTDLGLADGWFSWM*NIANHLLA 102
RV +K S ATS+V +T++++ I LVH +L +D L D F+WM I +HLLA
Sbjct: 58 RVVDHAKACS-FATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLA 116
Query: 101 RQQSVGHELASANSRC 54
Q+SV H+L+ ++S C
Sbjct: 117 LQKSVCHKLSCSDSHC 132
Score = 38.7 bits (86), Expect = 0.072
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = -3
Query: 436 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDQSE 257
LL T+ F T LHSVL FFTL + LL++ + G V L L ++ VVD ++
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 256 SVDLPPPKFVLK-PNTNTTSGVTLYILASFSRISV 155
+ K K + N G +++ FS S+
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSL 99
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 56.0 bits (129), Expect = 4e-07
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +3
Query: 63 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNFG 239
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 240 GGK 248
G K
Sbjct: 70 GFK 72
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 400
F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 76 FVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 55.6 bits (128), Expect = 6e-07
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 54 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 230
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 231 NFGGGKST 254
FGG ++T
Sbjct: 94 TFGGNRTT 101
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 400
FALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 103 FALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +3
Query: 87 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKST 254
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G ++T
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTT 63
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 47.6 bits (108), Expect = 2e-04
Identities = 19/63 (30%), Positives = 37/63 (58%)
Frame = +3
Query: 63 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 242
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 243 GKS 251
KS
Sbjct: 63 YKS 65
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 51 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 230
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 231 NFGGGKS 251
+G G S
Sbjct: 96 QYGVGVS 102
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 87 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 251
N+LLAR++++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRS 68
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.006
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 111 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 209
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 39.5 bits (88), Expect = 0.041
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 87 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 251
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGIS 77
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 37.5 bits (83), Expect = 0.17
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 382
F L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 55 FTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 36.7 bits (81), Expect = 0.29
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 87 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 239
N LL R+++ C + GK T S+ E+R K+A + P+ V V KT FG
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFG 63
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 35.9 bits (79), Expect = 0.51
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +3
Query: 39 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 218
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+V +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIK 68
Query: 219 GFKTNFGGGKS 251
T +G G S
Sbjct: 69 KIHTLYGAGIS 79
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 35.9 bits (79), Expect = 0.51
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +3
Query: 87 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 251
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLS 82
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 253 LIRFDLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 408
L + +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 108 LSKITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 34.3 bits (75), Expect = 1.5
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +3
Query: 57 ATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 236
+++R + N+L+ R++++ ++ H G T S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 237 GGGKS 251
G G S
Sbjct: 64 GQGVS 68
>UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Putative
uncharacterized protein - Alkaliphilus metalliredigens
QYMF
Length = 59
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -2
Query: 293 SWPDRVCRRSKRIS*LATSEVCLETEYEHYIGSNL 189
S PD+VC +KRI LA E + +Y+ Y+GS L
Sbjct: 21 SEPDKVCICAKRIQFLAEKEALAKEDYKRYLGSVL 55
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 33.5 bits (73), Expect = 2.7
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 277 CVVDQSESVDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQ 116
C D + LPPPK V+K +TN GV + + F+ +++L + G +S+
Sbjct: 875 CDCDSYKIKQLPPPKIVIKTDTN-YQGVNMTSMKGFAHNNLMLLLDVSGSMSSK 927
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 33.5 bits (73), Expect = 2.7
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -3
Query: 253 VDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNL 74
V PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N + +
Sbjct: 6 VSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTNKTL-V 64
Query: 73 RVRIVAVP 50
+V + VP
Sbjct: 65 QVNLTRVP 72
>UniRef50_Q22D17 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 389
Score = 33.1 bits (72), Expect = 3.6
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = -3
Query: 286 QIECVVDQSESVDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTIC 107
QI C ++QS+ + L + N N + + +LAS S L + +P KT Q+IC
Sbjct: 161 QINCDINQSKFLTLIKANQSNQTNQNYYQSIKVILLASLLA-SYLFSFIYPQIKTIQSIC 219
Query: 106 LRANNLL 86
L NL+
Sbjct: 220 LIHLNLI 226
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 33.1 bits (72), Expect = 3.6
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 87 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 239
N LL RK++ V H T K+E+ KLA + V +VV + ++ FG
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFG 61
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 32.3 bits (70), Expect = 6.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 401 YRGPSSFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 285
Y S C L+A C WA +++ +TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 32.3 bits (70), Expect = 6.2
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 87 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 239
N+L R + + V HP + T ++ E +EK+A+M V + + + + +G
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYG 62
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,891,955
Number of Sequences: 1657284
Number of extensions: 9340121
Number of successful extensions: 29118
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 27779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28988
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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