Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10508
         (498 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113512-1|AAM29517.1|  131|Drosophila melanogaster RE59324p pro...   130   1e-30
AE013599-3424|AAF46871.1|  131|Drosophila melanogaster CG3751-PA...   130   1e-30
AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p pro...    29   3.5  
AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondria...    29   3.5  
AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA...    29   3.5  
AY058609-1|AAL13838.1| 1392|Drosophila melanogaster LD30178p pro...    29   4.6  
AE014297-4494|AAF56980.2| 1392|Drosophila melanogaster CG7896-PA...    29   4.6  
BT022756-1|AAY55172.1|  287|Drosophila melanogaster IP14752p pro...    28   6.1  

>AY113512-1|AAM29517.1|  131|Drosophila melanogaster RE59324p
           protein.
          Length = 131

 Score =  130 bits (313), Expect = 1e-30
 Identities = 61/71 (85%), Positives = 65/71 (91%)
 Frame = +3

Query: 42  MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 221
           MS  TATIRTRKFMTNRLLARKQMVCDVLHPG  +V+KTEIREKLA MYKVTPDVVF FG
Sbjct: 1   MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFG 60

Query: 222 FKTNFGGGKST 254
           F+TNFGGG+ST
Sbjct: 61  FRTNFGGGRST 71



 Score = 94.3 bits (224), Expect = 8e-20
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = +2

Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 403
           FALIYDTLD AKKFEPK+RLARHGL+E+K+ TRKQRKER+NRMKKVRGT
Sbjct: 73  FALIYDTLDFAKKFEPKYRLARHGLFEQKKQTRKQRKERRNRMKKVRGT 121


>AE013599-3424|AAF46871.1|  131|Drosophila melanogaster CG3751-PA
           protein.
          Length = 131

 Score =  130 bits (313), Expect = 1e-30
 Identities = 61/71 (85%), Positives = 65/71 (91%)
 Frame = +3

Query: 42  MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 221
           MS  TATIRTRKFMTNRLLARKQMVCDVLHPG  +V+KTEIREKLA MYKVTPDVVF FG
Sbjct: 1   MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFG 60

Query: 222 FKTNFGGGKST 254
           F+TNFGGG+ST
Sbjct: 61  FRTNFGGGRST 71



 Score = 94.3 bits (224), Expect = 8e-20
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = +2

Query: 257 FALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 403
           FALIYDTLD AKKFEPK+RLARHGL+E+K+ TRKQRKER+NRMKKVRGT
Sbjct: 73  FALIYDTLDFAKKFEPKYRLARHGLFEQKKQTRKQRKERRNRMKKVRGT 121


>AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p
           protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 134 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVN*FALIYDTLDLAKKFEPKH 310
           R+     D+ P +    V+       R +F   LRRW    F  I + LDL  K  P H
Sbjct: 122 RRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTH 180


>AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondrial
           ribosomal proteinS15 protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 134 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVN*FALIYDTLDLAKKFEPKH 310
           R+     D+ P +    V+       R +F   LRRW    F  I + LDL  K  P H
Sbjct: 122 RRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTH 180


>AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA
           protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 134 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVN*FALIYDTLDLAKKFEPKH 310
           R+     D+ P +    V+       R +F   LRRW    F  I + LDL  K  P H
Sbjct: 122 RRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFEWILEKLDLVYKPPPTH 180


>AY058609-1|AAL13838.1| 1392|Drosophila melanogaster LD30178p
           protein.
          Length = 1392

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
 Frame = -3

Query: 358 FARGPLLLVQAVAG*PVLGLE--LLGQIEC----VVDQSESVDLPPPKFV-LKPNTNTTS 200
           F + P + + AV G   L L   +L Q++     VV   ES+D+       + P T    
Sbjct: 292 FGQFPTVALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFREM 351

Query: 199 GVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVM--NLRVRIVAVPSLILNY 32
           G   Y+  S + +  +      G  + QT+ ++ NN+L++  +   R+  + SL L+Y
Sbjct: 352 GALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDY 409


>AE014297-4494|AAF56980.2| 1392|Drosophila melanogaster CG7896-PA
           protein.
          Length = 1392

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
 Frame = -3

Query: 358 FARGPLLLVQAVAG*PVLGLE--LLGQIEC----VVDQSESVDLPPPKFV-LKPNTNTTS 200
           F + P + + AV G   L L   +L Q++     VV   ES+D+       + P T    
Sbjct: 292 FGQFPTVALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFREM 351

Query: 199 GVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVM--NLRVRIVAVPSLILNY 32
           G   Y+  S + +  +      G  + QT+ ++ NN+L++  +   R+  + SL L+Y
Sbjct: 352 GALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDY 409


>BT022756-1|AAY55172.1|  287|Drosophila melanogaster IP14752p
           protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 278 LDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 382
           L L KK E   R+ R G   KK PT+K++K++K +
Sbjct: 254 LKLLKKLEKIERMKRKGEGIKK-PTKKKKKKKKKK 287


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,444,414
Number of Sequences: 53049
Number of extensions: 436733
Number of successful extensions: 1347
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)