Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10504
(569 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 106 3e-24
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 105 3e-24
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 87 2e-18
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 55 8e-09
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 54 1e-08
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.051
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 32 0.051
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.12
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.12
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.27
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.48
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 28 1.1
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 28 1.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 1.5
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 1.9
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 2.6
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.6
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.4
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.4
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 26 3.4
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.4
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 3.4
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 26 3.4
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 3.4
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 4.5
SPAC19G12.03 |cda1||chitin deacetylase Cda1|Schizosaccharomyces ... 26 4.5
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 4.5
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 26 4.5
SPBC3B9.10 |vti1||SNARE Vti1|Schizosaccharomyces pombe|chr 2|||M... 26 4.5
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 4.5
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 4.5
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 4.5
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 5.9
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 5.9
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 5.9
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 25 5.9
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 7.8
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 7.8
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 25 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 106 bits (254), Expect = 3e-24
Identities = 50/91 (54%), Positives = 68/91 (74%)
Frame = +2
Query: 5 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 184
T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++
Sbjct: 493 TGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLD 552
Query: 185 DEKLKEKISDSDKQTILDKCNDTTSGWIPTS 277
D LK+K+ SDK+T+ DK T W+ ++
Sbjct: 553 DPNLKDKVDASDKETV-DKAVKETIEWLDSN 582
Score = 51.2 bits (117), Expect = 1e-07
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 235 RQVQRHHKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 357
+ V+ +WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 570 KAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 105 bits (253), Expect = 3e-24
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = +2
Query: 5 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 184
T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++
Sbjct: 493 TGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLD 552
Query: 185 DEKLKEKISDSDKQTILDKCNDTTSGWI 268
D LK+K+ SDK+ I DK T W+
Sbjct: 553 DPNLKDKVDASDKEAI-DKAVKETIEWL 579
Score = 53.6 bits (123), Expect = 2e-08
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1
Query: 235 RQVQRHHKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 357
+ V+ +WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 570 KAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 86.6 bits (205), Expect = 2e-18
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = +2
Query: 11 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-ED 187
K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +D
Sbjct: 525 KPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDD 584
Query: 188 EKLKEKISDSDKQTILDKCNDTTSGWI 268
E+L K+ DKQ +LD D W+
Sbjct: 585 EQLGGKVDPEDKQAVLDAVEDVAE-WL 610
Score = 30.7 bits (66), Expect = 0.16
Identities = 12/34 (35%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 256 KWLDSN-QLADKEEYEHKQKELEGIYNPIITKMY 354
+WL+ + + A KEE+E ++++L+ + +PI K+Y
Sbjct: 608 EWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 54.8 bits (126), Expect = 8e-09
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +2
Query: 2 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 181
+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S +
Sbjct: 535 ATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNL 593
Query: 182 EDEKLKEKISDSDKQTILDKCND 250
+ K+K+ + + K D
Sbjct: 594 DIH--KDKLDQQAVEDLRSKITD 614
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/77 (31%), Positives = 45/77 (58%)
Frame = +2
Query: 2 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 181
+T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+
Sbjct: 497 TTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTI 556
Query: 182 EDEKLKEKISDSDKQTI 232
+ + K+ DK I
Sbjct: 557 SEPNVMMKLKRGDKSKI 573
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.051
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 59 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 238
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 239 K 241
K
Sbjct: 79 K 79
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.3 bits (70), Expect = 0.051
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 23 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED 187
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDD 596
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.12
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +2
Query: 8 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 187
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 188 EKLKEKISD 214
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.12
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 41 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 220
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 221 KQTILDKCND 250
+ LDK D
Sbjct: 1318 EMEDLDKMED 1327
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.27
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 53 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 220
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.48
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 41 KGRLSKEEIERMVNEAEKYRNEDD 112
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 27.9 bits (59), Expect = 1.1
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +2
Query: 41 KGRLSKEEIERMVNEAEKYRNEDDKQKET----IQAKNALESYCFSMKSTMEDEKLKEKI 208
K +L EE ++ ++A+K N D++++ I K L + + E++ EK
Sbjct: 248 KNKLDNEEWDKAFSDAKKLSNMKDREEKLYIVPIDPKPILRAQAIPRRIQPEEQADYEK- 306
Query: 209 SDSDKQTILDKCNDTTSGWIPTSWPTRRSMSTSRKN 316
+D I+ +S +IP S PT++ T KN
Sbjct: 307 ELNDHVNIVK-----SSTYIPISIPTQKQKPTLPKN 337
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.9 bits (59), Expect = 1.1
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 19/178 (10%)
Frame = +2
Query: 38 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 187
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 188 ---EKLKEKISDSDKQTILDKCNDTTSGWIPTSWP--TRR-SMSTSRKNWKAFTIR*LRR 349
EK++EK+++ DK ++ D D TS TR S +T K K I + +
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPDQEIKNSRTSVQNGTRSVSKNTPEKETKVDKIDNVSK 846
Query: 350 CTRVPEESPEVCRASRA---EHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNTT 514
+ E SP C S A + E EV L ++ P S + P C ++
Sbjct: 847 --KDVETSPGSCETSSAFAKTYAEKEVTSINLPSVRKPLDESYYDHSISPFDPLCQSS 902
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +2
Query: 359 VPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNTTL*PLL 529
+P P S + P +PPP ++ P +P ++ P N+T P L
Sbjct: 236 IPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 74 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 178
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.6 bits (56), Expect = 2.6
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 59 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 235
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 236 DKCNDTTSGWIPTSWPTRRSMSTSRKNWKAFTI 334
+ + + +++T RK W T+
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRKLWPQSTL 582
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 2.6
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 14 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 184
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 3.4
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +2
Query: 56 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 208
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 209 SDSDKQTILDKCND 250
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 59 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 229
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 35 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 211
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 212 DSDKQT 229
+D+ T
Sbjct: 695 -TDRLT 699
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 404 HPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNTTL*P 523
H +P +L+PPS R++KP H+ P+ ++L P
Sbjct: 169 HLRSSMPLVMANSLSPPSSRALKP-IHSLSNPSTASSLEP 207
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 3.4
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 23 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 199
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 200 EKISDSDKQTILDKC 244
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.4
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 2/139 (1%)
Frame = +2
Query: 56 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 235
+E E AE+ N + ++E Q K A+E + + E E+ + ++ I
Sbjct: 791 REAEEEAARAAEEEANRELHEQEEAQ-KRAIEERTRAAREAKEREQREMAEKLERQRRIQ 849
Query: 236 DKCNDTTSGWIPTSWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRA--SRAEHP 409
+ ++ S + RR+ + R V +SP R SR P
Sbjct: 850 QERDEEISRKLAEKAAARRANIGASSPSPGAWRRGGASAGGVSRDSPRYSRGGYSRGSVP 909
Query: 410 EPEVPPPGLEALAPPSRRS 466
E P A PPSRR+
Sbjct: 910 PRETLAPSKGAYVPPSRRN 928
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 128 IQAKNA-LESYCFSMKS---TMEDEKLKEKISDSDKQTILDKCNDTTSGWIPTSW 280
+QA+ A LESY ++ T+ + K+++++SD KQ + +G T W
Sbjct: 114 LQARKANLESYRAKLEKEYKTLAENKIQQRLSDGTKQLVTIDGLQYITGVSDTKW 168
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 3.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 365 EESPEVCRASRAEHPEPE 418
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 53 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 175
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 4.5
Identities = 14/67 (20%), Positives = 31/67 (46%)
Frame = +2
Query: 56 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 235
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 236 DKCNDTT 256
D C ++
Sbjct: 754 DGCTTSS 760
>SPAC19G12.03 |cda1||chitin deacetylase Cda1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 25.8 bits (54), Expect = 4.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 253 HKWLDSNQLADKEEYEHKQKELEGI 327
H+W++ + + EYEH +K ++ I
Sbjct: 128 HRWINYEGVPPETEYEHIKKSVQAI 152
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.8 bits (54), Expect = 4.5
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Frame = +2
Query: 11 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 190
K N D+ + +EE E ++EK ++ K + KNA ++ M DE
Sbjct: 85 KANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDE 140
Query: 191 KLKEKISDSDKQTILDKCNDTTS-----GWIPTSWPTRRSMSTSRKN 316
+ E S K+ K D S G I +S ++ S++N
Sbjct: 141 EESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKEN 187
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 104 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTTS 259
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ S
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLS 286
>SPBC3B9.10 |vti1||SNARE Vti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 214
Score = 25.8 bits (54), Expect = 4.5
Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +2
Query: 14 ENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQA--KNALESYCFSMKSTME 184
E K+ + G S + +R++NE ++ + + + I + + S +ST+E
Sbjct: 16 EEKLNDLSKSGENSVIQSCQRLLNEIDEVIGQMEIEITGIPTSERGLVNGRIRSYRSTLE 75
Query: 185 DEK--LKEKISDSDKQTILDKCNDTTSGWI 268
+ + LKE+I SD++ + ++T+ +I
Sbjct: 76 EWRRHLKEEIGKSDRKALFGNRDETSGDYI 105
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 41 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 151
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +2
Query: 56 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 235
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 236 D 238
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 4.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 2 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 163
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 5.9
Identities = 16/73 (21%), Positives = 38/73 (52%)
Frame = +2
Query: 2 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 181
ST+ + + DK + E+I + ++Y NED+ + +++ A S+ ++ +T+
Sbjct: 387 STSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITNTI 445
Query: 182 EDEKLKEKISDSD 220
+ + KI +S+
Sbjct: 446 QAKYSNRKIKNSN 458
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.4 bits (53), Expect = 5.9
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 5/95 (5%)
Frame = +2
Query: 209 SDSDKQTILDKCNDT-----TSGWIPTSWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEES 373
S S + + LDK ND S P P + + S+ + T + T P+E
Sbjct: 370 SSSSEPSNLDKINDVKKNIEVSANEPQPRPVKEDVPKSQVGGETDTTDVINNST--PKEE 427
Query: 374 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 478
E ++ E PP E P S KP+
Sbjct: 428 TEESPSTELPETGKEQPPNKAEPAVPTEASSTKPS 462
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 5.9
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 17 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 193
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 194 LKEKISDSDK 223
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 5.9
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 23 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 202
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 203 KISDSDKQTILDK 241
K S +K DK
Sbjct: 298 KQSKIEKYMKSDK 310
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 7.8
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +2
Query: 41 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 211
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 212 DSDKQ--TILDK 241
D D++ T+ DK
Sbjct: 281 DKDQEQDTVSDK 292
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 7.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 50 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 220
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 25.0 bits (52), Expect = 7.8
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 101 NEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI--LDKCNDTTSGWIPT 274
+E+DK ++ IQ + +++ +++ ++EK+ + + +I K D SG +
Sbjct: 22 SEEDKLEKNIQDETSIKEVSLQDAKQSDEKGVEEKVFNDESFSIDVAPKPEDELSGIVKA 81
Query: 275 SWPTRRSMSTS 307
+ T S S
Sbjct: 82 RYLTEHSSRIS 92
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,049,355
Number of Sequences: 5004
Number of extensions: 39095
Number of successful extensions: 218
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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