Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10503
(838 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 175 3e-44
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 173 2e-43
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 173 2e-43
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 173 2e-43
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 172 3e-43
03_01_0034 + 318432-318825,318902-319851 172 3e-43
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 171 4e-43
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 167 1e-41
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 71 2e-12
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 71 2e-12
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 70 2e-12
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 69 5e-12
01_03_0124 + 12734846-12735356,12735449-12736041 33 0.21
03_06_0593 + 34946665-34946952,34947484-34947798,34948246-349483... 31 1.5
12_02_0614 - 21172290-21172480,21174927-21175164 29 6.1
02_05_1127 + 34292894-34293284,34293948-34295443 29 6.1
02_05_0453 + 29132041-29132293,29133309-29133388,29133622-291337... 29 6.1
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 6.1
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 28 8.0
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 8.0
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 175 bits (427), Expect = 3e-44
Identities = 77/84 (91%), Positives = 84/84 (100%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 180
KNSSYFVEWIPNNVK++VCDIPPRGLKMAATF+GNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 181 HWYTGEGMDEMEFTEAESNMNDLV 252
HWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLV 419
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 173 bits (420), Expect = 2e-43
Identities = 76/84 (90%), Positives = 83/84 (98%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 180
KNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 181 HWYTGEGMDEMEFTEAESNMNDLV 252
HWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLV 419
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 173 bits (420), Expect = 2e-43
Identities = 76/84 (90%), Positives = 83/84 (98%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 180
KNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 357 KNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 416
Query: 181 HWYTGEGMDEMEFTEAESNMNDLV 252
HWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 417 HWYTGEGMDEMEFTEAESNMNDLV 440
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 173 bits (420), Expect = 2e-43
Identities = 76/84 (90%), Positives = 83/84 (98%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 180
KNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 181 HWYTGEGMDEMEFTEAESNMNDLV 252
HWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLV 419
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 172 bits (419), Expect = 3e-43
Identities = 75/84 (89%), Positives = 83/84 (98%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 180
KNSSYFVEWIPNNVK++VCDIPPRGL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 516 KNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFL 575
Query: 181 HWYTGEGMDEMEFTEAESNMNDLV 252
HWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 576 HWYTGEGMDEMEFTEAESNMNDLV 599
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 172 bits (418), Expect = 3e-43
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 180
KNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 181 HWYTGEGMDEMEFTEAESNMNDLV 252
HWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLV 419
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 171 bits (417), Expect = 4e-43
Identities = 76/84 (90%), Positives = 83/84 (98%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 180
KNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 336 KNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFL 395
Query: 181 HWYTGEGMDEMEFTEAESNMNDLV 252
HWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 396 HWYTGEGMDEMEFTEAESNMNDLV 419
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 167 bits (405), Expect = 1e-41
Identities = 73/84 (86%), Positives = 81/84 (96%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFL 180
KNSSYFVEWIPNNVK++VCDIPP GL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFL
Sbjct: 352 KNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFL 411
Query: 181 HWYTGEGMDEMEFTEAESNMNDLV 252
HWYT EGMDEMEFTEAESNMNDLV
Sbjct: 412 HWYTSEGMDEMEFTEAESNMNDLV 435
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 70.5 bits (165), Expect = 2e-12
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTA 156
K + FV+W P K + PP ++ A I N+TA+ E+F RI +F
Sbjct: 338 KRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL 397
Query: 157 MFRRKAFLHWYTGEGMDEMEFTEAESNM 240
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Frame = +1
Query: 16 FVEWIPNNVKTAVCDIPPRGL--------KMAATFIGNSTAIQELFKRISEQFTAMFRRK 171
FV+W P K + PP + + A I N+TA+ E+F RI +F M+ ++
Sbjct: 424 FVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKR 483
Query: 172 AFLHWYTGEGMDEMEFTEAESNM 240
AF+HWY GEGM+E EF+EA ++
Sbjct: 484 AFVHWYVGEGMEEGEFSEAREDL 506
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTA 156
K + FV+W P K + PP ++ A I NST++ E+F RI +F
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDL 397
Query: 157 MFRRKAFLHWYTGEGMDEMEFTEAESNM 240
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDL 425
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 68.9 bits (161), Expect = 5e-12
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 KNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTA 156
K + FV+W P K + PP ++ A I NST++ E+F RI +F
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDL 397
Query: 157 MFRRKAFLHWYTGEGMDEMEFTEAESNM 240
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDL 425
>01_03_0124 + 12734846-12735356,12735449-12736041
Length = 367
Score = 33.5 bits (73), Expect = 0.21
Identities = 32/105 (30%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Frame = -2
Query: 354 RLVKGLSCPRFPAPAPRQTLRPRRRWPPGTVGTRDKVVHVALSL-SELHLVHALAGVPMQ 178
R G + F AP P + P R W P V R + L A A V
Sbjct: 123 RQFTGFNATGFVAPPPSPSPIPPRSWLPCCVDWRSSGAVTGVKLQGSCASCWAFAAVAAI 182
Query: 177 ESLAPEHSGELFRDALEQLLDGGGVSNE-GGGHLETTRGNVAHGG 46
E L +GEL + + ++D SN GGG +T G VA G
Sbjct: 183 EGLHRIKTGELVSLSEQVMVDCDTGSNGCGGGRSDTALGLVASRG 227
>03_06_0593 +
34946665-34946952,34947484-34947798,34948246-34948374,
34948774-34949169
Length = 375
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = -2
Query: 273 PGTVGTRDKVVHVALSLSELHLVHALAGVPMQESLAPEHSGELFRDALEQLLDGGGVSNE 94
P TV + H A +++E L A + Q + E G + + G GV N+
Sbjct: 270 PATVNDEEMYAH-AKAVAESMLGEANVKLSPQ-GMGAEDFG-FYAQRIPAAFFGIGVGND 326
Query: 93 GGGHLETTRGNVAHGGLHVVGD 28
GGG ETT N H VV +
Sbjct: 327 GGGMAETTTKNQLHSPHFVVDE 348
>12_02_0614 - 21172290-21172480,21174927-21175164
Length = 142
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 186 PMQESLAPEHSGELF--RDALEQLLDGGGVSNEGGGHLETTRGNVA 55
P +P H GE + RD E+L GG GGG + + G A
Sbjct: 91 PQTLEKSPPHQGERYSNRDPAEELASGGSAGAVGGGLVGSLGGGGA 136
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 306 RQTLRPRRRWPPGTVG 259
R T +P+RRWPPG+ G
Sbjct: 83 RATGQPKRRWPPGSSG 98
>02_05_0453 +
29132041-29132293,29133309-29133388,29133622-29133740,
29134131-29134191
Length = 170
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 246 VVHVALSLSELHLVHALAGVPMQESLAPEHSGELFRD-ALEQL 121
+VH A LHLVHA++ V L E S EL D A+E L
Sbjct: 67 LVHFARMADTLHLVHAVSSV--NNDLVYEKSQELMEDLAIEAL 107
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 254 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 132
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 48 RRVRHSPSWSQDGRHLHWKLHRHPGAVQAHLG 143
RR H P+W +G H + H H H G
Sbjct: 565 RRHHHPPAWDVEGHHHDRQQHSHEAGRNHHRG 596
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 233 LSASVNSISSMPSPVYQCKKALRLNIAVN 147
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,369,302
Number of Sequences: 37544
Number of extensions: 408290
Number of successful extensions: 1384
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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