Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10502
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 35 0.077
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 31 0.94
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 31 0.94
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 31 0.94
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 31 0.94
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 31 0.94
Z83109-10|CAB05520.2| 435|Caenorhabditis elegans Hypothetical p... 30 2.2
Z81491-14|CAN86584.1| 117|Caenorhabditis elegans Hypothetical p... 29 2.9
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 29 5.0
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 29 5.0
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 28 6.7
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 3 QRTSTYGHFGRAGFPWESPKPL 68
++T+ GHFG + FPWE PK L
Sbjct: 359 EKTAENGHFGHSEFPWEQPKAL 380
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 9 TSTYGHFGRAGFPWESPKPLIVE 77
T+ GHFG FPWE P+ L ++
Sbjct: 362 TAENGHFGHNEFPWEQPRHLQID 384
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 9 TSTYGHFGRAGFPWESPKPL 68
T+ GHFG FPWE P+ L
Sbjct: 311 TAENGHFGHNNFPWEQPRNL 330
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 9 TSTYGHFGRAGFPWESPKPL 68
T+ GHFG FPWE P+ L
Sbjct: 362 TAENGHFGHNNFPWEQPRNL 381
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 9 TSTYGHFGRAGFPWESPKPLIVE 77
T+ GHFG FPWE P+ L ++
Sbjct: 321 TAENGHFGHNEFPWEQPRHLQID 343
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 9 TSTYGHFGRAGFPWESPKPLIVE 77
T+ GHFG FPWE P+ L ++
Sbjct: 303 TAENGHFGHNEFPWEQPRHLQID 325
>Z83109-10|CAB05520.2| 435|Caenorhabditis elegans Hypothetical
protein F44G3.8 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.2
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = -2
Query: 771 LLNACNIYV*NLILKVDLHLIIYNYLANLQCGTIFAVKRKKAKLNFVSFSFTRSTVTQPE 592
LL IY+ N ++++L+ I+ NYLA+++ +A F+ S Q
Sbjct: 193 LLAKIKIYLDNTRIQLNLNEIVVNYLADIESPIKYAETAFGGLAEFIEHSKFGLETFQVT 252
Query: 591 K*FTLQKIH-STYIIKLITKNIRD-CRQSITLKQNKRTLAIIES 466
T+ KI+ Y KL+ +D C Q T+ TL+ I S
Sbjct: 253 NCTTINKINRRIYFEKLLEIFKKDRCLQVKTVHFTNFTLSEISS 296
>Z81491-14|CAN86584.1| 117|Caenorhabditis elegans Hypothetical
protein D1086.19 protein.
Length = 117
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = -2
Query: 633 VSFSFTRSTVTQPEK*FTLQKIHSTYIIKLITKNIRDCRQSITLKQNKRTLAIIES*NS 457
++ S R + E+ F + I Y I+ +T+++RDCR + ++ R+ I +S +S
Sbjct: 37 LAVSKRRKLLDMKERDFRCE-ILQNYFIQRLTRHLRDCRNNRIARKRSRSFVIRDSQSS 94
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 9 TSTYGHFGRAGFPWESPKPLIVE 77
T+ GHFG FPWE + L ++
Sbjct: 311 TAENGHFGHNDFPWEQARKLKID 333
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 9 TSTYGHFGRAGFPWESPKPLIVE 77
T+ GHFG FPWE + L ++
Sbjct: 362 TAENGHFGHNDFPWEQARKLKID 384
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 143 YVCHCSEGAASPVS 184
Y CHCSEG P+S
Sbjct: 331 YCCHCSEGTCHPIS 344
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 143 YVCHCSEGAASPVS 184
Y CHCSEG P+S
Sbjct: 331 YCCHCSEGTCHPIS 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,397,321
Number of Sequences: 27780
Number of extensions: 350140
Number of successful extensions: 629
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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