Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10497
(791 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 158 2e-37
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 155 1e-36
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 152 1e-35
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 148 2e-34
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 127 4e-28
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 123 6e-27
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 116 9e-25
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 115 2e-24
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 109 6e-23
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 100 4e-20
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 99 1e-19
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 98 2e-19
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 89 1e-16
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 88 3e-16
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 7e-14
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 69 2e-10
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 58 3e-07
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 48 3e-04
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 44 0.003
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 44 0.004
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 43 0.010
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 42 0.013
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 40 0.095
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.095
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 38 0.38
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 38 0.38
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 38 0.38
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 37 0.50
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.67
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_UPI0000DD81A8 Cluster: PREDICTED: SET domain containing... 35 2.7
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 34 3.6
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 34 3.6
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 34 3.6
UniRef50_A0L8P8 Cluster: Methyl-accepting chemotaxis sensory tra... 34 4.7
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 34 4.7
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 6.2
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 8.2
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 158 bits (383), Expect = 2e-37
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 11/145 (7%)
Frame = +3
Query: 150 MEGLCTSCRWRQRQARIP---DETGRPDKQPCSSSD------VKGHSCYRPRRDGERKRK 302
+ G C W+ RI D+ G P KQ ++ KGHSCYRPRR GERKRK
Sbjct: 36 VSGECLGDEWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRK 95
Query: 303 SVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRR 482
SVRGCIVD+ LSVL+LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+
Sbjct: 96 SVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQ 155
Query: 483 YVVKRVLPARKEKKTLN--PDIRHL 551
YV++R LP ++ KK + P I+ L
Sbjct: 156 YVIRRPLPEKEGKKAKSKAPKIQRL 180
Score = 134 bits (323), Expect = 3e-30
Identities = 57/79 (72%), Positives = 66/79 (83%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 199 FPMKQGVLTNSRVRLLMSK 255
FPMKQG++TN RVRLL+SK
Sbjct: 61 FPMKQGIMTNGRVRLLLSK 79
Score = 60.9 bits (141), Expect = 4e-08
Identities = 34/70 (48%), Positives = 41/70 (58%)
Frame = +2
Query: 503 PSKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKK 682
P KEGK K + KAPKIQRLVTPVVLQ A+YAKLLA+R K
Sbjct: 163 PEKEGK---KAKSKAPKIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLLAKRAK 219
Query: 683 ESKVRRQEEI 712
E+K +R E++
Sbjct: 220 EAKEKRHEQL 229
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 155 bits (376), Expect = 1e-36
Identities = 76/101 (75%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
KGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD VPRRLGPKRA
Sbjct: 79 KGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRA 138
Query: 432 SKIRKLFNLSKEDDVRRYVVKRVLPAR-KEKKTLNPDIRHL 551
S+IRKLFNLSKEDDVR+YVV++ L K+ +T P I+ L
Sbjct: 139 SRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRL 179
Score = 139 bits (336), Expect = 8e-32
Identities = 62/79 (78%), Positives = 70/79 (88%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 199 FPMKQGVLTNSRVRLLMSK 255
FPMKQGVLT+ RVRLL+SK
Sbjct: 61 FPMKQGVLTHGRVRLLLSK 79
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/65 (53%), Positives = 39/65 (60%)
Frame = +2
Query: 518 KENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKKESKVR 697
KE KPR KAPKIQRLVTP VLQ AEYAKLLA+R KE+K +
Sbjct: 164 KEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEK 223
Query: 698 RQEEI 712
RQE+I
Sbjct: 224 RQEQI 228
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 152 bits (368), Expect = 1e-35
Identities = 73/102 (71%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++IPGLTD V RRLGPKRA
Sbjct: 79 KGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRA 138
Query: 432 SKIRKLFNLSKEDDVRRYVVKRVLPAR--KEKKTLNPDIRHL 551
S IRKL+NL+KEDDVR+YVVKR LP + K+ +T P I+ L
Sbjct: 139 SNIRKLYNLTKEDDVRQYVVKRPLPEKDGKKPRTKAPKIQRL 180
Score = 144 bits (348), Expect = 3e-33
Identities = 63/79 (79%), Positives = 72/79 (91%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 199 FPMKQGVLTNSRVRLLMSK 255
FPMKQGVLTN+RVRLL+ K
Sbjct: 61 FPMKQGVLTNTRVRLLLKK 79
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/70 (42%), Positives = 41/70 (58%)
Frame = +2
Query: 503 PSKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKK 682
P K+GK KPR KAPKIQRL+TPVVLQ +EAEY K+L R++
Sbjct: 163 PEKDGK---KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRR 219
Query: 683 ESKVRRQEEI 712
+ ++RR+ +
Sbjct: 220 QERIRRRSRL 229
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 148 bits (358), Expect = 2e-34
Identities = 67/76 (88%), Positives = 71/76 (93%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 199 FPMKQGVLTNSRVRLL 246
FPMKQGVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 58.4 bits (135), Expect = 2e-07
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Frame = +3
Query: 177 WRQRQARIP---DETGRPDKQPCSSSD-----VKGHSCYRPRRDGERKRKSVRGCIVDAN 332
W+ Q RI D+ G P KQ + K HSC+ PR + RK K+VR V+AN
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEAN 104
Query: 333 LSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAR 512
+S L LV+++K P RLGP R+S I K++ L +EDD V+ L R
Sbjct: 105 VSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD---EVIPVKLQRR 151
Query: 513 KEKKTLN 533
+KK N
Sbjct: 152 HQKKRQN 158
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 127 bits (306), Expect = 4e-28
Identities = 58/100 (58%), Positives = 74/100 (74%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG EIPGLTD V ++LGPKRA
Sbjct: 120 KGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRA 179
Query: 432 SKIRKLFNLSKEDDVRRYVVKRVLPARKEKKTLNPDIRHL 551
+KIRKLFNL K DDVR+YV+ R + + + + P I+ L
Sbjct: 180 TKIRKLFNLDKTDDVRKYVIGRAISKNGKNRFIKPKIQRL 219
Score = 101 bits (243), Expect = 2e-20
Identities = 48/79 (60%), Positives = 56/79 (70%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 199 FPMKQGVLTNSRVRLLMSK 255
FPM QGVLTN+RVRLL K
Sbjct: 102 FPMMQGVLTNNRVRLLFKK 120
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 123 bits (296), Expect = 6e-27
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 199 FPMKQGVLTNSRVRLLM 249
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
Frame = +3
Query: 372 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLPARKEKK 524
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAK 135
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 116 bits (278), Expect = 9e-25
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 199 FPMKQGVLTNSRVRLLMSK 255
FPM+QGVL RVR+LM K
Sbjct: 61 FPMRQGVLFKGRVRILMRK 79
Score = 111 bits (268), Expect = 1e-23
Identities = 56/104 (53%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR
Sbjct: 79 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRL 138
Query: 432 SKIRKLFNLSKEDD---VRRYVVKRVLPARKEKKTLN-PDIRHL 551
+K+R+LF K D V++ +++R + KK P I+ L
Sbjct: 139 TKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKKRQKAPKIQRL 182
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 115 bits (276), Expect = 2e-24
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 199 FPMKQGVLTNSRVRLLMSK 255
FPMKQGV+ RVRLL+S+
Sbjct: 61 FPMKQGVMVRGRVRLLLSE 79
Score = 109 bits (261), Expect = 1e-22
Identities = 56/104 (53%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG EI GLT +PR+LGPKRA
Sbjct: 79 EGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKRA 138
Query: 432 SKIRKLFNLSKEDD---VRRYVVKRVLPARKEK-KTLNPDIRHL 551
+ I+KLF L KEDD +++ V++R K K +T P I+ L
Sbjct: 139 NNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKDRTKCPKIQRL 182
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 109 bits (263), Expect = 6e-23
Identities = 50/75 (66%), Positives = 59/75 (78%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR
Sbjct: 84 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRL 143
Query: 432 SKIRKLFNLSKEDDV 476
+K+R+LF K D V
Sbjct: 144 TKLRRLFGFKKADRV 158
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 100 bits (240), Expect = 4e-20
Identities = 43/80 (53%), Positives = 64/80 (80%)
Frame = +3
Query: 258 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 437
+ CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI G+T+ +P R GP+RAS
Sbjct: 80 NGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASH 139
Query: 438 IRKLFNLSKEDDVRRYVVKR 497
RKLFNLS++DDV+++V++R
Sbjct: 140 FRKLFNLSQKDDVKKFVIRR 159
Score = 97.9 bits (233), Expect = 3e-19
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +1
Query: 22 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 201
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 202 PMKQGVLTNSRVRLLM 249
PM GV TN+RVRLL+
Sbjct: 61 PMMTGVATNNRVRLLL 76
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/90 (52%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +3
Query: 285 GERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 464
GER+RK+VRGC++ ++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+
Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152
Query: 465 EDDVRRYVV-KRVLPARKEKKTLNPDIRHL 551
+DVR+YVV +RV+ + K+ + P I+ L
Sbjct: 153 TEDVRKYVVRRRVVKSGKKDRLKAPKIQRL 182
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 195
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 196 GFPMKQGVLTNSRVRLLMSK 255
GFPM GVL +SRV LL+ +
Sbjct: 61 GFPMVPGVLASSRVSLLVKR 80
Score = 33.9 bits (74), Expect = 4.7
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +2
Query: 518 KENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKKESKVR 697
K K R KAPKIQRL+TP V + EY +L+A ++ + R
Sbjct: 167 KSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQR 226
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/100 (49%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 GHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 434
G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +EI GLT VPRR GPKRAS
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRAS 139
Query: 435 KIRKLFNLS-KEDDVRRYVVKRVLPARKEKKTLNPDIRHL 551
+R +F ++ + D + V+KR + K K +P ++ L
Sbjct: 140 TLRAMFGITDSKFDASKLVLKREV---KPGKFTSPKVQRL 176
Score = 90.6 bits (215), Expect = 4e-17
Identities = 37/77 (48%), Positives = 56/77 (72%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 199 FPMKQGVLTNSRVRLLM 249
FPMKQGV+T R+RLL+
Sbjct: 61 FPMKQGVITPRRIRLLL 77
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
+G CY RR+GERKRKS+RGCIV +L L++V+V G + +PGLTD VP+RL PKRA
Sbjct: 85 QGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRA 144
Query: 432 SKIRKLFNL 458
SKIR+LF L
Sbjct: 145 SKIRRLFGL 153
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +1
Query: 22 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 201
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 202 PMKQGVLTNSRVRLLM 249
PM QGVL + R RLL+
Sbjct: 68 PMYQGVLKSQRARLLL 83
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 87.8 bits (208), Expect = 3e-16
Identities = 36/81 (44%), Positives = 56/81 (69%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 199 FPMKQGVLTNSRVRLLMSKAT 261
FPMK+G+L+ SRV++L+ K +
Sbjct: 61 FPMKEGILSPSRVKILLKKGS 81
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +3
Query: 279 RDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL 458
+ GER RKSVRGCIV +SVL + ++ ++ +T+ N + L KR+S +RK+ L
Sbjct: 90 KKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCL 148
Query: 459 SKEDDVRRYVVK 494
+K DD+R++ +K
Sbjct: 149 TKTDDIRKHYIK 160
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 7e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 156
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/99 (38%), Positives = 56/99 (56%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
KG + YR RR G R+RKSVRG IV + VL L+I+R G +EI GLT+ P++
Sbjct: 64 KGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKE 123
Query: 432 SKIRKLFNLSKEDDVRRYVVKRVLPARKEKKTLNPDIRH 548
K+RK+F + E+ ++ +L + + P IRH
Sbjct: 124 KKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRH 162
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/65 (41%), Positives = 46/65 (70%)
Frame = +1
Query: 61 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 240
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 241 LLMSK 255
L+SK
Sbjct: 60 PLLSK 64
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 57.6 bits (133), Expect = 3e-07
Identities = 38/94 (40%), Positives = 52/94 (55%)
Frame = +3
Query: 252 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 431
K HSC+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+
Sbjct: 25 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRS 74
Query: 432 SKIRKLFNLSKEDDVRRYVVKRVLPARKEKKTLN 533
S I K++ L +EDD V+ L R +KK N
Sbjct: 75 SNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 105
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/96 (29%), Positives = 54/96 (56%)
Frame = +1
Query: 19 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 199 FPMKQGVLTNSRVRLLMSKATHVTDRAAMERENVNQ 306
F +K+ + T R+++ + K + + +R+ +R+N+ +
Sbjct: 60 FLLKKNLNTFERLKINVKKGS-LGNRSHFKRKNLTK 94
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 44.4 bits (100), Expect = 0.003
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Frame = +1
Query: 13 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV- 165
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 166 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATHVTDRAAMER 291
L + GG DK GFPM+ + RVR+L+SK + ER
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPGFRPKEKGER 102
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 44.0 bits (99), Expect = 0.004
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Frame = +1
Query: 13 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------ 165
A KL +S P G K E+ ++ +R+G E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 166 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATHVTDRAAMER 291
L++ GG DK GFPM+ V RV++L+S+ R ER
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPGFRPRERGER 102
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 109 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKAT 261
++G E LG KGY LR+ GG+DK GFPMK+ V R + L++ T
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 42.3 bits (95), Expect = 0.013
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 58 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 231
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 232 RVRLLMS 252
+ R L+S
Sbjct: 193 KKRALLS 199
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 39.5 bits (88), Expect = 0.095
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 22 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 201
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 202 PMKQGVLTNSRVRLLMSKATHVTDRAAMERE-NVNQFVDVLLTPIS 336
MKQ VL + RV LL++ + RE N D + PIS
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDAVKLPIS 96
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.5 bits (88), Expect = 0.095
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +1
Query: 13 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 192
+V+K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 193 QGFPMKQGV 219
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 37.5 bits (83), Expect = 0.38
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 112 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATHVTD 273
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+S+ + D
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRD 89
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 37.5 bits (83), Expect = 0.38
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +1
Query: 13 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 192
A ++ V+ P +G FEV D F + +GA V+ +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 193 QGFPMKQGVLTNSRVRLLMSKATHVTDRAAMERENV 300
G PM++ V + + +L+ ER+ V
Sbjct: 59 AGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRV 94
Score = 37.1 bits (82), Expect = 0.50
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 204 DETGRPDKQPCSSSDV-----KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 368
D+ GRP ++ SD+ +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHG 116
Query: 369 AQEIPGL 389
+ + L
Sbjct: 117 EEPVAEL 123
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 37.5 bits (83), Expect = 0.38
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 204
+S P TG QK+ E + ++L K++G +V + + D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFP 62
Query: 205 MKQGVLTNSRVRLLMS 252
M+ + +R RLL+S
Sbjct: 63 MRPDLPGTARRRLLLS 78
Score = 33.1 bits (72), Expect = 8.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 267 YRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 368
+RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 83 FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 37.1 bits (82), Expect = 0.50
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 249 HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 145
H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 177 HEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 36.7 bits (81), Expect = 0.67
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Frame = +3
Query: 195 RIPDETGRPDKQP--------CSSSDVKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 350
R+P+E G+ + +P C+ GH+ R R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 351 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKL 449
+ A P RR+GP RA +++ L
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDL 141
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 156 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKGHS 263
G C RWR ++ + DE G + PC+ DV+G S
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRGCS 52
>UniRef50_UPI0000DD81A8 Cluster: PREDICTED: SET domain containing
1B; n=1; Homo sapiens|Rep: PREDICTED: SET domain
containing 1B - Homo sapiens
Length = 2145
Score = 34.7 bits (76), Expect = 2.7
Identities = 29/88 (32%), Positives = 39/88 (44%)
Frame = -2
Query: 385 PGISWAPLRTITRAKTERLASTIHPRTDLRFLSPSRRGL*HEWPLTSEDEHGCLSGRPVS 206
PG + A RT T A T + TI PR+ LR+ P P TS E G +
Sbjct: 441 PGATRASSRTPTTAATNIIMYTILPRS-LRWPGPQPLS---GVPRTSRSEQSAALG---A 493
Query: 205 SGILACRCRQRHEVHSPSIHRLTDQPLL 122
+ + R R + H P++H QPLL
Sbjct: 494 AAVPRSRLNHRIQPHLPTLHHPPKQPLL 521
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 34.3 bits (75), Expect = 3.6
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 106 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 255
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+++
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAE 79
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 112 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATHVTDRAAMER 291
+G E +A +G K L++ GG+DK G PM+ + +R +L+SK + D +R
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVGLQDAEKGQR 89
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 34.3 bits (75), Expect = 3.6
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +1
Query: 106 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 255
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L+ +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKE 75
>UniRef50_A0L8P8 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Magnetococcus sp. MC-1|Rep:
Methyl-accepting chemotaxis sensory transducer -
Magnetococcus sp. (strain MC-1)
Length = 515
Score = 33.9 bits (74), Expect = 4.7
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 112 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATHVTDRAAMER 291
+ A +EA + GD KG+ + A D +Q + ++V+ ++++ H TDRA M
Sbjct: 364 LNASIEAAKAGDSGKGFAVVAAEVKDLA----EQSEESTAQVQKILTEIQHATDRAVMAT 419
Query: 292 ENVNQFVDVLLTPISRS 342
E + VD + +SR+
Sbjct: 420 EEGVKDVDQGVILMSRT 436
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 150 MEGLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKGHSC 266
+ G C +CR R+ + +P + GRP+ C SS GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGRCISS---GHTC 41
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 33.9 bits (74), Expect = 4.7
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 73 VDEHKLRIFYEKRMGAEVEADQL-GDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 249
VD++K ++G EA+QL G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 250 S 252
S
Sbjct: 178 S 178
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 6.2
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 348 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 488
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 33.5 bits (73), Expect = 6.2
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 22 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 198
KL+ SY A L EV D+ K RI+YE A ++ GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 199 FPMKQGVL 222
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 8.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 223 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 125
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,651,342
Number of Sequences: 1657284
Number of extensions: 15147451
Number of successful extensions: 45516
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 43717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45489
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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