Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10496
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 131 4e-31
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.004
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 31 0.85
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 25 1.4
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 25 1.4
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 25 1.4
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 25 1.4
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 25 1.4
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 25 1.4
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 25 1.4
U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical... 29 3.4
AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical... 29 3.4
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 6.0
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 28 6.0
U41263-8|AAC24430.1| 455|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 131 bits (317), Expect = 4e-31
Identities = 61/96 (63%), Positives = 72/96 (75%)
Frame = +1
Query: 1 GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLK 180
GPKKHLKRL AP WMLDKLGGV+A RP+ GPHKLRE LPL +FLRNRLKYAL E K
Sbjct: 3 GPKKHLKRLAAPSHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKK 62
Query: 181 IVKQRLIKVDGKVRTDPTYPAGFMELSQLRRLMNCF 288
I+ QR+++VDGKVRT +P GFM++ + R F
Sbjct: 63 ILTQRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYF 98
Score = 117 bits (282), Expect = 8e-27
Identities = 53/76 (69%), Positives = 63/76 (82%)
Frame = +2
Query: 509 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 688
KFE GNL +TGGRN+GRVG I RER PG+ DI+HIKDS GH+FATR++NVF+IGKG K
Sbjct: 173 KFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNK 232
Query: 689 AYISLPRGKGIRLTIA 736
A +SLP G GIRL+IA
Sbjct: 233 ALVSLPTGAGIRLSIA 248
Score = 115 bits (276), Expect = 4e-26
Identities = 53/90 (58%), Positives = 65/90 (72%)
Frame = +3
Query: 255 VVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIR 434
VV+IE+TNE FR++YD KGR+ +HRI EA +KLCKVK V T K VP L T DGRTIR
Sbjct: 88 VVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIR 147
Query: 435 YPDPLIKVNDSIQLDIATTKIMDFISLSLG 524
YPDP +KVND+I +I+T KI D + G
Sbjct: 148 YPDPHVKVNDTIVFNISTQKITDSVKFEPG 177
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 568 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 732
HH E H H G HGTH H GH G H A A GH HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 559 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 732
A HH E H H G HGTH H GH G H A A GH H
Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEH 522
Score = 35.5 bits (78), Expect = 0.040
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = +1
Query: 568 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 732
HHR E AH G HGTH H E H+ H G H + H P H
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAH 454
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +1
Query: 607 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHH 732
H AH HG H RH E H+ H G H GH H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH--GTHHGHHGEH 432
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +1
Query: 538 HGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAA 708
HG G+ G H T L H H G HGTH H H+ HE G H A
Sbjct: 643 HGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAH-HGA 701
Query: 709 RQGH 720
GH
Sbjct: 702 HHGH 705
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = +1
Query: 568 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQR----VHNRQGHEGVHLAAARQGHPPHH 732
HH E H H G HGTH H E H G G H H P H
Sbjct: 502 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAH 560
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 565 GHHRVPRETSRLLRHCAHQGLHGTHL-RHEVEQRVHNRQGHEGVHLAAARQGHPPHH 732
GHH H H G HG H H H+ GH G H H PHH
Sbjct: 588 GHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH--GHHGAH-----HHHAPHH 637
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 568 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 732
HH P H G HG H H GH G H H P H
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH 685
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Frame = +1
Query: 568 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRV---HNRQGHEGVHLAAARQGHPPHH 732
HH P H +H HG H H H G GVH G+ HH
Sbjct: 567 HHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH 624
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +1
Query: 565 GHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH 696
G H P H H HG H H ++ H+ GH H
Sbjct: 678 GAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKH 721
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +1
Query: 568 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 732
HH E H H G HG+H H H GH H A A GH H
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGH---HESHGHG--HHAPAHHGHHGEH 609
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 613 AHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHH 732
AH G HG H H H G H G H H HH
Sbjct: 622 AHHGHHGAHHHHAPHHEHHEHHGDHHHGSH-GVHHGHHGTHH 662
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 607 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHH 732
HC G HG H R H G G R GH PPHH
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHH 402
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 607 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 732
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 448 LSKSTIPSS*TSQLRRLWTS*V*VWELVYDHGR-P*LGACGHHRVPRETSRLLRHCAH 618
+SK I S+ +W+ V +WE ++ GR P GA + +R L C H
Sbjct: 770 MSKEAIEQGRFSEASDVWSFGVTLWE-IWSFGRQPYEGASNQQVIELVANRHLLECPH 826
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 646 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 738
H + Q+ +NR G H ++ G PP H+R
Sbjct: 867 HSILQQHNNRAGS---HSGSSGAGRPPTHQR 894
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 448 LSKSTIPSS*TSQLRRLWTS*V*VWELVYDHGR-P*LGACGHHRVPRETSRLLRHCAH 618
+SK I S+ +W+ V +WE ++ GR P GA + +R L C H
Sbjct: 770 MSKEAIEQGRFSEASDVWSFGVTLWE-IWSFGRQPYEGASNQQVIELVANRHLLECPH 826
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 646 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 738
H + Q+ +NR G H ++ G PP H+R
Sbjct: 867 HSILQQHNNRAGS---HSGSSGAGRPPTHQR 894
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 448 LSKSTIPSS*TSQLRRLWTS*V*VWELVYDHGR-P*LGACGHHRVPRETSRLLRHCAH 618
+SK I S+ +W+ V +WE ++ GR P GA + +R L C H
Sbjct: 770 MSKEAIEQGRFSEASDVWSFGVTLWE-IWSFGRQPYEGASNQQVIELVANRHLLECPH 826
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 646 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 738
H + Q+ +NR G H ++ G PP H+R
Sbjct: 867 HSILQQHNNRAGS---HSGSSGAGRPPTHQR 894
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 448 LSKSTIPSS*TSQLRRLWTS*V*VWELVYDHGR-P*LGACGHHRVPRETSRLLRHCAH 618
+SK I S+ +W+ V +WE ++ GR P GA + +R L C H
Sbjct: 744 MSKEAIEQGRFSEASDVWSFGVTLWE-IWSFGRQPYEGASNQQVIELVANRHLLECPH 800
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 646 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 738
H + Q+ +NR G H ++ G PP H+R
Sbjct: 841 HSILQQHNNRAGS---HSGSSGAGRPPTHQR 868
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 448 LSKSTIPSS*TSQLRRLWTS*V*VWELVYDHGR-P*LGACGHHRVPRETSRLLRHCAH 618
+SK I S+ +W+ V +WE ++ GR P GA + +R L C H
Sbjct: 744 MSKEAIEQGRFSEASDVWSFGVTLWE-IWSFGRQPYEGASNQQVIELVANRHLLECPH 800
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 646 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 738
H + Q+ +NR G H ++ G PP H+R
Sbjct: 841 HSILQQHNNRAGS---HSGSSGAGRPPTHQR 868
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 448 LSKSTIPSS*TSQLRRLWTS*V*VWELVYDHGR-P*LGACGHHRVPRETSRLLRHCAH 618
+SK I S+ +W+ V +WE ++ GR P GA + +R L C H
Sbjct: 744 MSKEAIEQGRFSEASDVWSFGVTLWE-IWSFGRQPYEGASNQQVIELVANRHLLECPH 800
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 646 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 738
H + Q+ +NR G H ++ G PP H+R
Sbjct: 841 HSILQQHNNRAGS---HSGSSGAGRPPTHQR 868
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 448 LSKSTIPSS*TSQLRRLWTS*V*VWELVYDHGR-P*LGACGHHRVPRETSRLLRHCAH 618
+SK I S+ +W+ V +WE ++ GR P GA + +R L C H
Sbjct: 611 MSKEAIEQGRFSEASDVWSFGVTLWE-IWSFGRQPYEGASNQQVIELVANRHLLECPH 667
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 646 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 738
H + Q+ +NR G H ++ G PP H+R
Sbjct: 708 HSILQQHNNRAGS---HSGSSGAGRPPTHQR 735
>U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical
protein C48B6.4 protein.
Length = 623
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = +3
Query: 309 GRFTIHRITPEEAKYKLCKVKRVATGPKNVP-----YLVTHDGRTIR-YP 440
G+ + R+T E Y+ CK+++ A K VP Y+V H R I+ YP
Sbjct: 302 GQIIVRRLTDPEYPYRHCKIQKFAVRCKLVPENYGWYVVWHCQRDIQEYP 351
>AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical
protein Y48B6A.13b protein.
Length = 377
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 526 LVYDHGRP*LGACGHHRVPRETSRLLRH 609
LV+D GR +G+ R RETS+LL+H
Sbjct: 207 LVFDDGRKKVGSSEGMRRSRETSQLLKH 234
>AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical
protein Y48B6A.13a protein.
Length = 326
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 526 LVYDHGRP*LGACGHHRVPRETSRLLRH 609
LV+D GR +G+ R RETS+LL+H
Sbjct: 156 LVFDDGRKKVGSSEGMRRSRETSQLLKH 183
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 425 HHPLPRPTYQSQRFHPVRHRNYEDYGLH 508
HH PTY F+P H++Y+ + L+
Sbjct: 32 HHHHQSPTYPQSYFNPYSHQSYQQHHLN 59
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 719 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 630
C C+ A C P CP + + CS T R C+P
Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -3
Query: 466 ESLTLISGSG*RMVRPSCVTKYGTFLGPVATRLTLHNLYLASSGVIRWIVNLPLT 302
E ++ + G V P C Y PVA + H Y A + ++R N P T
Sbjct: 868 EQASMYNAEG-EFVNPFCRLSYAPKQPPVAANIANHKAYFAQAVLVRGPGNCPET 921
>U41263-8|AAC24430.1| 455|Caenorhabditis elegans Hypothetical
protein T19D12.10 protein.
Length = 455
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 243 WIYGVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDG 422
++YG V+ T F D +HR + K+ K V +G K+VPYL
Sbjct: 190 YLYGGVAFLVTTAFFAFFRDSA---QVHRNVSVKELEKISAGKTVTSGRKSVPYLAVCKN 246
Query: 423 RTI 431
+ I
Sbjct: 247 KVI 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,940,152
Number of Sequences: 27780
Number of extensions: 440826
Number of successful extensions: 1498
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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