Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10495
         (786 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131259-1|BAD18437.1|  512|Homo sapiens   protein.                    31   3.6  
AY435145-1|AAR95646.1|  402|Homo sapiens I-branching beta-1,6-ac...    30   8.2  
AL139039-2|CAH73009.1|  226|Homo sapiens protein ( Human DNA seq...    30   8.2  
AK090483-1|BAC03464.1|  402|Homo sapiens FLJ00405 protein protein.     30   8.2  
AF458024-1|AAM73864.1|  402|Homo sapiens I beta-1,6-N-acetylgluc...    30   8.2  
AB078432-1|BAC66781.1|  401|Homo sapiens beta-1,6-N-acetylglucos...    30   8.2  

>AK131259-1|BAD18437.1|  512|Homo sapiens   protein.
          Length = 512

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 185 TPMLNSLKIKPLCQTLSNAFA-TSKKRAPVYNGFGRLSPTRMCSVRRCTC*TH 30
           TP L SL  K   Q +S A A +S KR   Y+ +  LS T  CSV RC   TH
Sbjct: 21  TPFL-SLPPKVANQPMSAAAAGSSLKRQLSYSRYLALSSTNTCSVCRCLSLTH 72


>AY435145-1|AAR95646.1|  402|Homo sapiens I-branching
           beta-1,6-acetylglucosaminyltransferase family
           polypeptide 1 protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 161 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 60
           +K L     NAF  SKK + VY G  RL     C
Sbjct: 140 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 173


>AL139039-2|CAH73009.1|  226|Homo sapiens protein ( Human DNA
           sequence from clone RP11-360O19 on chromosome 6 Contains
           anovel gene, a glucosaminyl (N-acetyl) transferase 1
           core 2  ).
          Length = 226

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 161 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 60
           +K L     NAF  SKK + VY G  RL     C
Sbjct: 58  VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 91


>AK090483-1|BAC03464.1|  402|Homo sapiens FLJ00405 protein protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 161 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 60
           +K L     NAF  SKK + VY G  RL     C
Sbjct: 140 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 173


>AF458024-1|AAM73864.1|  402|Homo sapiens I
           beta-1,6-N-acetylglucosaminyltransferase A form protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 161 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 60
           +K L     NAF  SKK + VY G  RL     C
Sbjct: 140 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 173


>AB078432-1|BAC66781.1|  401|Homo sapiens
           beta-1,6-N-acetylglucosaminyltransferase 2 protein.
          Length = 401

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 161 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 60
           +K L     NAF  SKK + VY G  RL     C
Sbjct: 139 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 172


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,479,680
Number of Sequences: 237096
Number of extensions: 2900939
Number of successful extensions: 11462
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11462
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)