Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10495
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   1.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 127  KAFDKVWHNGLIFKLFNMG 183
            KA+ KV  N +IF+++ MG
Sbjct: 1542 KAYQKVEENEIIFEIYKMG 1560


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 147 PDFVERFCDVEEESSRV*RFW 85
           PD   R  DV EE   + +FW
Sbjct: 199 PDLNYRNSDVREEMKNIMKFW 219


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 765  SSPCSEGHFTPLTDHGVESTENKRGTV 685
            SS  SE H  PL++H   S ++   T+
Sbjct: 1319 SSGSSEDHRRPLSEHIYSSIDSDYSTL 1345


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 177 VE*FENQTIVPDFVERFCDVEEESSR 100
           VE +EN+  +P+  E F D+  +  R
Sbjct: 343 VEGWENRATIPELNEEFRDLRLQDLR 368


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 433 SFRAQPSPRTVVPKMAHRHQ 492
           +FRA P+P T++ K+  + +
Sbjct: 251 NFRAGPTPGTILKKLCPQEE 270


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 433 SFRAQPSPRTVVPKMAHRHQ 492
           +FRA P+P T++ K+  + +
Sbjct: 166 NFRAGPTPGTILKKLCPQEE 185


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 433 SFRAQPSPRTVVPKMAHRHQ 492
           +FRA P+P T++ K+  + +
Sbjct: 485 NFRAGPTPGTILKKLCPQEE 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,898
Number of Sequences: 438
Number of extensions: 5190
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)