Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10493
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.82 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   7.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +1

Query: 58  GQGISITKFLNTRNQIY*NKIRE*IITCFTCKVNFRALDLKKISHMVKTVNSLILLLDDW 237
           G G S   FL    QI+ ++    II+     V FR+LDL K    V+ +     L  +W
Sbjct: 113 GYGSSRNTFLI--GQIFPSQHHIGIISRLNSDVQFRSLDLSKAKTTVRLLKKPPSLDSEW 170

Query: 238 KTT 246
           K++
Sbjct: 171 KSS 173


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +3

Query: 312  VGIWLRRYHQENNLFDRDFSYCHVSNHQHYYIPSFSPTP 428
            V +W  R H E + +       H   H+  ++  F+P+P
Sbjct: 912  VRLWTGRKHGEVDFYLSQVLSGHAFVHEFLHVFGFAPSP 950


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,483
Number of Sequences: 2352
Number of extensions: 14533
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)