Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10491
(496 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 157 2e-37
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 134 1e-30
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 108 6e-23
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 108 8e-23
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 101 9e-21
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 98 1e-19
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 95 1e-18
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 93 4e-18
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 85 1e-15
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 82 8e-15
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 77 2e-13
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 76 4e-13
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 76 5e-13
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 75 7e-13
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 69 4e-11
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 68 1e-10
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 66 5e-10
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 63 4e-09
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 63 4e-09
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 62 5e-09
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 59 6e-08
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 56 6e-07
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 53 4e-06
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 52 9e-06
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 48 2e-04
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 46 5e-04
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 46 5e-04
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 44 0.002
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 43 0.003
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.006
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 40 0.023
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 38 0.16
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 37 0.28
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.28
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 0.38
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 35 0.87
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 35 0.87
UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n... 34 2.0
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 34 2.0
UniRef50_Q7RN67 Cluster: DHHC zinc finger domain, putative; n=5;... 33 2.7
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 4.6
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 32 6.1
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 32 6.1
UniRef50_Q4T031 Cluster: Chromosome undetermined SCAF11373, whol... 32 8.1
UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1; Scene... 32 8.1
UniRef50_Q5QXW9 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 32 8.1
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 157 bits (380), Expect = 2e-37
Identities = 70/87 (80%), Positives = 82/87 (94%)
Frame = +2
Query: 2 FNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 181
FN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHY
Sbjct: 3 FNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHY 62
Query: 182 KGQQVGKVMQVYRKKFVVYIERIQKKR 262
KGQQ+GKV+QVYRKK+V+YIER+Q+++
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 71.7 bits (168), Expect = 8e-12
Identities = 33/51 (64%), Positives = 42/51 (82%)
Frame = +1
Query: 253 KEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 405
+EKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 87 REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 134 bits (323), Expect = 1e-30
Identities = 59/87 (67%), Positives = 76/87 (87%)
Frame = +2
Query: 2 FNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 181
FN VTS R K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRGHY
Sbjct: 3 FNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRGHY 62
Query: 182 KGQQVGKVMQVYRKKFVVYIERIQKKR 262
+GQQ+GKV+QVYRKK+V+YI+++++++
Sbjct: 63 EGQQIGKVVQVYRKKYVIYIKQVEREK 89
Score = 54.4 bits (125), Expect = 1e-06
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +1
Query: 253 KEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 405
+EKANG T VGIHPSK VI +LK+ +DRK IL+R+ +GK+KGKY
Sbjct: 87 REKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 108 bits (260), Expect = 6e-23
Identities = 51/86 (59%), Positives = 67/86 (77%)
Frame = +2
Query: 5 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 184
N + SSRRK+R HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 185 GQQVGKVMQVYRKKFVVYIERIQKKR 262
G++ GKV VYR K+ +++ERI + +
Sbjct: 65 GRE-GKVTSVYRLKWAIHVERISRDK 89
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1
Query: 250 SKEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 390
S++K+NG + + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 86 SRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 108 bits (259), Expect = 8e-23
Identities = 46/87 (52%), Positives = 71/87 (81%)
Frame = +2
Query: 2 FNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 181
FNKQ++S+RRK RK HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + RGH
Sbjct: 32 FNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICRGHN 91
Query: 182 KGQQVGKVMQVYRKKFVVYIERIQKKR 262
G++ GKV+++ RK+F +Y+ER+ +++
Sbjct: 92 HGRE-GKVVKINRKRFKIYVERVTREK 117
Score = 54.0 bits (124), Expect = 2e-06
Identities = 21/38 (55%), Positives = 32/38 (84%)
Frame = +1
Query: 250 SKEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 363
++EKANG + ++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 114 TREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 101 bits (242), Expect = 9e-21
Identities = 47/83 (56%), Positives = 66/83 (79%)
Frame = +2
Query: 14 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 193
V+S RRK RK +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG KGQ+
Sbjct: 8 VSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE 67
Query: 194 VGKVMQVYRKKFVVYIERIQKKR 262
GK+ VYR KF V ++++ K++
Sbjct: 68 -GKISSVYRLKFAVQVDKVTKEK 89
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +1
Query: 250 SKEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 375
+KEK NGA+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 86 TKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 97.9 bits (233), Expect = 1e-19
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +2
Query: 5 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 184
N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG YK
Sbjct: 4 NPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRGSYK 63
Query: 185 G 187
G
Sbjct: 64 G 64
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 94.7 bits (225), Expect = 1e-18
Identities = 43/84 (51%), Positives = 65/84 (77%)
Frame = +2
Query: 11 QVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQ 190
+V+S RRK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG +KG
Sbjct: 6 EVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRGTHKGT 65
Query: 191 QVGKVMQVYRKKFVVYIERIQKKR 262
+ GKV VYRK++ + IE++ + +
Sbjct: 66 K-GKVSSVYRKRWTIQIEKLTRTK 88
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 250 SKEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 390
++ KANG + I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 85 TRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 92.7 bits (220), Expect = 4e-18
Identities = 45/87 (51%), Positives = 64/87 (73%)
Frame = +2
Query: 2 FNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 181
++ VTSSRRK RK HF+APS RR LMS+ LS EL+ + ++PIR +DEV+V RG +
Sbjct: 22 YSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRVTRGSF 81
Query: 182 KGQQVGKVMQVYRKKFVVYIERIQKKR 262
K ++ GKV+QVYRKK+V++I I + +
Sbjct: 82 KNRE-GKVVQVYRKKWVIHIANITRDK 107
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 84.6 bits (200), Expect = 1e-15
Identities = 41/87 (47%), Positives = 63/87 (72%)
Frame = +2
Query: 2 FNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 181
FN +V+S+ K RK ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++GH
Sbjct: 3 FNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKGHQ 62
Query: 182 KGQQVGKVMQVYRKKFVVYIERIQKKR 262
K GKV V R K+V+ I+++ K +
Sbjct: 63 K--VAGKVTAVRRSKYVINIDKLTKTK 87
Score = 45.2 bits (102), Expect = 8e-04
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 250 SKEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 372
+K KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 84 TKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 81.8 bits (193), Expect = 8e-15
Identities = 38/62 (61%), Positives = 53/62 (85%)
Frame = +2
Query: 77 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQK 256
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++RI
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 257 KR 262
++
Sbjct: 105 EK 106
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 77.0 bits (181), Expect = 2e-13
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +2
Query: 5 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 184
N VT+SRRK RK +F+A + R +MSS LSKELR + +K+MPIR+ D V++ G +K
Sbjct: 4 NSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTGGHK 63
Query: 185 GQQVGKVMQVYRKKFVVYIERIQKK 259
G GKV++V R+ + + +E I +K
Sbjct: 64 G--TGKVVEVRRRDYKICVEGINQK 86
Score = 31.9 bits (69), Expect = 8.1
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 289 IHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALGK 390
IHPS C+I +L MN R + RR + RLA +GK
Sbjct: 99 IHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 76.2 bits (179), Expect = 4e-13
Identities = 35/78 (44%), Positives = 56/78 (71%)
Frame = +2
Query: 29 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 208
RK RK F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG +KG + G+V+
Sbjct: 10 RKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVI 68
Query: 209 QVYRKKFVVYIERIQKKR 262
+V K++ +Y+E KR
Sbjct: 69 KVDLKRYRIYVEGANNKR 86
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 75.8 bits (178), Expect = 5e-13
Identities = 35/54 (64%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Frame = +2
Query: 107 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQKKR 262
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+++
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEK 71
Score = 66.1 bits (154), Expect = 4e-10
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +1
Query: 253 KEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 405
+EKANG T +VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 69 QEKANGTTVHVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 75.4 bits (177), Expect = 7e-13
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = +2
Query: 17 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 196
+S RK RK F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 197 GKVMQVYRKKFVVYIE 244
G+V++V K+ +Y+E
Sbjct: 65 GEVVEVDLKRLRIYVE 80
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 69.3 bits (162), Expect = 4e-11
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 250 SKEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 405
++EK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 95 TREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
Score = 64.5 bits (150), Expect = 1e-09
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = +2
Query: 65 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 244
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++E
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
Query: 245 RIQKKR 262
RI +++
Sbjct: 93 RITREK 98
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 67.7 bits (158), Expect = 1e-10
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +2
Query: 29 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 208
RK RK +AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 209 QVYRKKFVVYI 241
+ K + VY+
Sbjct: 82 DIDPKYYRVYL 92
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 65.7 bits (153), Expect = 5e-10
Identities = 31/83 (37%), Positives = 53/83 (63%)
Frame = +2
Query: 17 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 196
+S RK K AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 197 GKVMQVYRKKFVVYIERIQKKRP 265
GKV +V K+ +Y++ K+P
Sbjct: 66 GKVTRVDYKRVRIYVDSASFKKP 88
Score = 37.1 bits (82), Expect = 0.22
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 250 SKEKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 387
S +K +G Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 84 SFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 62.9 bits (146), Expect = 4e-09
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +2
Query: 8 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 187
KQ TSSRRK RK HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 188 QQVGKVMQVYRKKFVVYIE 244
++ G + ++ + + VYIE
Sbjct: 66 KE-GVISKINYRDYKVYIE 83
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 62.9 bits (146), Expect = 4e-09
Identities = 31/83 (37%), Positives = 56/83 (67%)
Frame = +2
Query: 14 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 193
++S K RK ++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 194 VGKVMQVYRKKFVVYIERIQKKR 262
GKV++V RK+ V IE + KK+
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKK 83
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 62.5 bits (145), Expect = 5e-09
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +2
Query: 8 KQVTSSRRKNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 184
K +S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 185 GQQVGKVMQVYRKKFVVYIE 244
G + GKV V KK +++E
Sbjct: 63 GHE-GKVTSVDVKKGRIHVE 81
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 58.8 bits (136), Expect = 6e-08
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Frame = +1
Query: 250 SKEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 396
++EK NG T +V +HPS C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 86 TREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/86 (30%), Positives = 49/86 (56%)
Frame = +2
Query: 5 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 184
N ++S +K RK F+A + +S+ L+KE + VK +PIR+DDEV + G +
Sbjct: 5 NPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSGKFA 64
Query: 185 GQQVGKVMQVYRKKFVVYIERIQKKR 262
G++ GKV+ V + + ++ +++
Sbjct: 65 GRE-GKVIAVKLSENRIVVDSFTREK 89
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 55.6 bits (128), Expect = 6e-07
Identities = 28/87 (32%), Positives = 54/87 (62%)
Frame = +2
Query: 2 FNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 181
+ VT SRRKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG +
Sbjct: 3 YKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRGDF 62
Query: 182 KGQQVGKVMQVYRKKFVVYIERIQKKR 262
KG + GKV+Q+ ++ ++++ I + +
Sbjct: 63 KG-KTGKVIQIKPEQQKIFVDNIFRNK 88
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 8 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 187
+ V+ RK RK ++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 188 QQVGKVMQV 214
+ GKV V
Sbjct: 66 TE-GKVQSV 73
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 51.6 bits (118), Expect = 9e-06
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = +2
Query: 20 SSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 199
+++ +NR+ + A + R + + SPLSKELR K+ +S+ + + D V VVRG YK G
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-G 60
Query: 200 KVMQVYRKKFVVYIERIQKKR 262
KV V + V IE I+K++
Sbjct: 61 KVSHVDTESGSVAIEGIKKEK 81
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/73 (31%), Positives = 44/73 (60%)
Frame = +2
Query: 32 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 211
K RK AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 212 VYRKKFVVYIERI 250
V K V+++E +
Sbjct: 66 VDLDKAVIHVEDV 78
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 46.0 bits (104), Expect = 5e-04
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = +2
Query: 29 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 208
+ K + A + + S LSK+L++K+ +S+ + + D V ++RG +KG GKV
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVA 63
Query: 209 QVYRKKFVVYIERIQKKR 262
+V K V IE ++K++
Sbjct: 64 EVSTAKSSVAIEGVKKEK 81
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 46.0 bits (104), Expect = 5e-04
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +2
Query: 89 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQKKR 262
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + +K+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKK 64
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +2
Query: 95 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 250
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGI 59
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +2
Query: 95 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 250
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IE +
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEGV 60
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 42.3 bits (95), Expect = 0.006
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +2
Query: 125 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQKKRPMVQQHMSA 289
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ + ++HM A
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVN----VAKRHMRA 50
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 40.3 bits (90), Expect = 0.023
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2
Query: 2 FNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 94
FN +T NRKRH +APSH+RR +MSSP
Sbjct: 99 FNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.5 bits (83), Expect = 0.16
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 59 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 238
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 239 IERI 250
+E +
Sbjct: 64 VEGV 67
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 36.7 bits (81), Expect = 0.28
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 14 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 181
V+ K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDF 57
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.28
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 134 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 250
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 0.38
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 448 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 335
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 35.1 bits (77), Expect = 0.87
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +2
Query: 5 NKQVTSSR--RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 178
NKQ+ S RK ++ S P R + SP+SK ++Q +S+ IR D V H
Sbjct: 18 NKQMARSHGERKRTRKKLSKPKRARGL---SPISKAIQQFEPGESVHIRIDPSVHKGMPH 74
Query: 179 YKGQ-QVGKVMQVYRKKFVVYIERIQKKRPMVQQ 277
+ GKV+ + F+V I ++KR V++
Sbjct: 75 QRFHGMTGKVIGERGRAFIVEISDGKRKRKKVKE 108
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 35.1 bits (77), Expect = 0.87
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2
Query: 128 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQKKR 262
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + K++
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0080 UniRef100 entry -
Rattus norvegicus
Length = 294
Score = 33.9 bits (74), Expect = 2.0
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 406 CIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECRHMLLHHWPF--LLNPLNVY 233
C+ C+C C +C +C + T +HT +G HM +H F LL+ ++
Sbjct: 43 CVRACVCMYVRTCMYVCVCVCVCTDRHTHT-HTHTKRGRRMHMCIHEHSFQLLLSFCWLH 101
Query: 232 -NKLFTIHLHHFANLLAFV 179
++ +HL ++ LL FV
Sbjct: 102 RDERCFVHLQNYIYLLCFV 120
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 33.9 bits (74), Expect = 2.0
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 134 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQKKRPMVQ 274
M I++ D+VQV+ G YKG ++ +V++V RK + ++ I K V+
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKSNSLILKNINIKNKHVK 46
>UniRef50_Q7RN67 Cluster: DHHC zinc finger domain, putative; n=5;
Plasmodium|Rep: DHHC zinc finger domain, putative -
Plasmodium yoelii yoelii
Length = 284
Score = 33.5 bits (73), Expect = 2.7
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 271 HHWPFLLNPLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGF 128
HH P++ N + YN+ F I L + + F+V+T ++I N + +
Sbjct: 126 HHCPWINNCVGFYNRRFFIQLLFYGLICLFMVATQTFHYIFIDNINAY 173
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 32.7 bits (71), Expect = 4.6
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 241 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 146
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 32.7 bits (71), Expect = 4.6
Identities = 13/39 (33%), Positives = 27/39 (69%)
Frame = +2
Query: 134 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 250
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + +
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGV 41
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 32.3 bits (70), Expect = 6.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 409 RCIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECR 284
+C C +++ +CPL+C + L CG + + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 32.3 bits (70), Expect = 6.1
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 140 IRKDDEVQVVRGHYKGQQVGKVMQVYRK 223
I+K D V VVRG KG+Q GKV++VY +
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVYER 32
>UniRef50_Q4T031 Cluster: Chromosome undetermined SCAF11373, whole
genome shotgun sequence; n=9; Eumetazoa|Rep: Chromosome
undetermined SCAF11373, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 2172
Score = 31.9 bits (69), Expect = 8.1
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 307 HTLKGECRHMLLH--HWPFLLNPLNVYNKLFTIHLHHFANLL 188
H L H LLH H LL+PL++ + L+ HLHH +LL
Sbjct: 1742 HPLHLHHLHHLLHPLHLHHLLHPLHLLHPLYLHHLHHPLHLL 1783
>UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 7805|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH7805)
Length = 260
Score = 31.9 bits (69), Expect = 8.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 435 GLHGCGSFLGVFTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL 301
GL GCG F FT + K + A S +D F+ F+ L ++ +
Sbjct: 68 GLDGCGKFFRSFTKLHPKSASLAYGSKSKDSFSYFLDFTLSHNLI 112
>UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1;
Scenedesmus obliquus|Rep: DNA-directed RNA polymerase -
Scenedesmus obliquus
Length = 1529
Score = 31.9 bits (69), Expect = 8.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 241 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIE 119
N++N F + L+ F +LAF+ Y ++F F +H F E
Sbjct: 614 NLFNLFFDVSLN-FGKILAFLKLYYEIDFCSFVQKHSFDFE 653
>UniRef50_Q5QXW9 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Idiomarina
loihiensis
Length = 104
Score = 31.9 bits (69), Expect = 8.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 140 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 250
I++DDEV V+ G KG+Q GKV++V K V +E +
Sbjct: 5 IKRDDEVVVLAGKDKGKQ-GKVLKVLTDKDRVIVEGV 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,160,472
Number of Sequences: 1657284
Number of extensions: 9124477
Number of successful extensions: 24788
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 24023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24764
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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