Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10491
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical p...   100   1e-21
Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical pr...   100   1e-21
Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical pr...   100   1e-21
AL031637-1|CAA21047.2|  317|Caenorhabditis elegans Hypothetical ...    28   4.3  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U23513-3|AAB36862.1|  209|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z92817-3|CAJ43914.1|  511|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z92817-2|CAJ43913.1|  510|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical
           protein F28C6.7c protein.
          Length = 109

 Score = 99.5 bits (237), Expect = 1e-21
 Identities = 45/86 (52%), Positives = 67/86 (77%)
 Frame = +2

Query: 5   NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 184
           N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG +K
Sbjct: 4   NPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRGRHK 63

Query: 185 GQQVGKVMQVYRKKFVVYIERIQKKR 262
           G   G+V++ YRKKFV++I++I +++
Sbjct: 64  G-NTGRVLRCYRKKFVIHIDKITREK 88



 Score = 33.9 bits (74), Expect = 0.065
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +1

Query: 250 SKEKANGATAYVGIHPSK 303
           ++EKANG+T ++GIHPSK
Sbjct: 85  TREKANGSTVHIGIHPSK 102


>Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical
           protein F28C6.7b protein.
          Length = 106

 Score = 99.5 bits (237), Expect = 1e-21
 Identities = 45/86 (52%), Positives = 67/86 (77%)
 Frame = +2

Query: 5   NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 184
           N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG +K
Sbjct: 4   NPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRGRHK 63

Query: 185 GQQVGKVMQVYRKKFVVYIERIQKKR 262
           G   G+V++ YRKKFV++I++I +++
Sbjct: 64  G-NTGRVLRCYRKKFVIHIDKITREK 88



 Score = 33.9 bits (74), Expect = 0.065
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +1

Query: 250 SKEKANGATAYVGIHPSK 303
           ++EKANG+T ++GIHPSK
Sbjct: 85  TREKANGSTVHIGIHPSK 102


>Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical
           protein F28C6.7a protein.
          Length = 142

 Score = 99.5 bits (237), Expect = 1e-21
 Identities = 45/86 (52%), Positives = 67/86 (77%)
 Frame = +2

Query: 5   NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 184
           N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG +K
Sbjct: 4   NPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRGRHK 63

Query: 185 GQQVGKVMQVYRKKFVVYIERIQKKR 262
           G   G+V++ YRKKFV++I++I +++
Sbjct: 64  G-NTGRVLRCYRKKFVIHIDKITREK 88



 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 28/52 (53%), Positives = 41/52 (78%)
 Frame = +1

Query: 250 SKEKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 405
           ++EKANG+T ++GIHPSK  I KLK++KDR+A+++R+A GR    G  KGK+
Sbjct: 85  TREKANGSTVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILKGKH 136


>AL031637-1|CAA21047.2|  317|Caenorhabditis elegans Hypothetical
           protein Y47H9B.2 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 439 KRPPWLWQFPRCIYPCLCQVQPVC 368
           ++ PW ++    +YP LC++  +C
Sbjct: 249 RKYPWYYKMSSAMYPALCELAGIC 272


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 265 WPFLLNPLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIEF 116
           W    N     ++LFT +L+H   LL     TY+  F++  N    ++ F
Sbjct: 196 WKLKPNGRKYRDQLFTTYLNHCTKLLL----TYSQKFVILTNSEVHFVVF 241


>U23513-3|AAB36862.1|  209|Caenorhabditis elegans Hypothetical
           protein D2021.8 protein.
          Length = 209

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = -1

Query: 196 NLL--AFVVSTYNLNFIVFANRHGFYIEFLS*FLRQG 92
           NLL  A VV ++NL+ ++ A +HG ++E +   L+QG
Sbjct: 11  NLLKPAVVVDSFNLHAVISATQHG-HVESVEAALKQG 46


>Z92817-3|CAJ43914.1|  511|Caenorhabditis elegans Hypothetical
           protein W08G11.3b protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
 Frame = +2

Query: 56  APSHIRRVLMSSPLSKELRQ-----KFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYR 220
           A + I+R+L     S++L       K N++   IRK+DE+++   +YK   + K      
Sbjct: 240 ANAEIQRLLRELDSSQQLENSSITDKRNIEEELIRKEDEIRL--ANYKSATLLKAANDKI 297

Query: 221 KKFVVYIERIQKKRPMVQQHMSAFTL 298
           +K  +   R+++++P V   M+  T+
Sbjct: 298 EKLEL---RLKQEKPAVHNEMTVETI 320


>Z92817-2|CAJ43913.1|  510|Caenorhabditis elegans Hypothetical
           protein W08G11.3a protein.
          Length = 510

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
 Frame = +2

Query: 56  APSHIRRVLMSSPLSKELRQ-----KFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYR 220
           A + I+R+L     S++L       K N++   IRK+DE+++   +YK   + K      
Sbjct: 239 ANAEIQRLLRELDSSQQLENSSITDKRNIEEELIRKEDEIRL--ANYKSATLLKAANDKI 296

Query: 221 KKFVVYIERIQKKRPMVQQHMSAFTL 298
           +K  +   R+++++P V   M+  T+
Sbjct: 297 EKLEL---RLKQEKPAVHNEMTVETI 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,702,307
Number of Sequences: 27780
Number of extensions: 235500
Number of successful extensions: 655
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)