Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10489
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56965-11|AAB52666.1|  137|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z81514-7|CAH60785.1|  167|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z92782-10|CAE17812.1|  377|Caenorhabditis elegans Hypothetical p...    27   9.6  
AL117204-35|CAB55154.2|  861|Caenorhabditis elegans Hypothetical...    27   9.6  
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical...    27   9.6  

>U56965-11|AAB52666.1|  137|Caenorhabditis elegans Hypothetical
           protein C15H9.9 protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 519 VLLHALFVKDSEPVNCWACSSNVNPLCN 602
           VLL +L +  S  ++C+ C+SN NP C+
Sbjct: 7   VLLASLALGVSANISCYQCTSNENPTCD 34


>Z81514-7|CAH60785.1|  167|Caenorhabditis elegans Hypothetical
           protein F26F2.8 protein.
          Length = 167

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 519 VLLHALFVKDSEPVNCWACSSN 584
           +L   LF   +E +NCW+C+S+
Sbjct: 5   LLYSMLFTSSAEAINCWSCASD 26


>U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical
           protein F53B1.2 protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 589 IRCATILLISVSTPGILICSASKTATRMLER 681
           +RC T+L+ S+S PGI +   ++  T M E+
Sbjct: 271 LRCFTMLITSLSVPGIHLQCEARPNTTMQEK 301


>Z92782-10|CAE17812.1|  377|Caenorhabditis elegans Hypothetical
           protein F14F8.10 protein.
          Length = 377

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = -1

Query: 246 YVTLTFVTC*IGVLNLIVAII--VFNQLQIAV 157
           Y+TL  +T  IGVLN I+AI+  + N L I +
Sbjct: 34  YMTLVNLTQYIGVLNYIIAIVGLIANTLHIVI 65


>AL117204-35|CAB55154.2|  861|Caenorhabditis elegans Hypothetical
           protein Y116A8C.14 protein.
          Length = 861

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 436 IFSSALVFSDNLVSLLCIIMAKLSFLCPFC 525
           +F SA+VFS  L  LL +    +   CP+C
Sbjct: 808 VFISAIVFSILLSILLVVFFGNVKIDCPWC 837


>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
           protein Y75B8A.26 protein.
          Length = 1144

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 595 CATILLISVSTPGILICSA 651
           C  ++LIS+STP  L+C+A
Sbjct: 710 CMILVLISISTPIFLVCAA 728


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,810,719
Number of Sequences: 27780
Number of extensions: 311589
Number of successful extensions: 658
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)