Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10486
(762 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36) 71 8e-13
SB_28855| Best HMM Match : SCP2 (HMM E-Value=0.0011) 43 2e-04
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 41 0.001
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 36 0.047
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 33 0.33
SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23) 32 0.58
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_10508| Best HMM Match : SCP2 (HMM E-Value=9.1e-08) 30 1.8
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 30 2.4
SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_55319| Best HMM Match : Hexapep (HMM E-Value=0.16) 29 3.1
SB_48762| Best HMM Match : Hexapep (HMM E-Value=0.3) 29 4.1
SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3) 29 4.1
SB_47787| Best HMM Match : DUF1556 (HMM E-Value=3.4) 29 4.1
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 29 4.1
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_42806| Best HMM Match : MORN (HMM E-Value=0) 29 5.5
SB_21892| Best HMM Match : Hexapep (HMM E-Value=3.8e-05) 29 5.5
SB_58895| Best HMM Match : SRCR (HMM E-Value=0) 28 7.2
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016) 28 9.5
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 9.5
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 28 9.5
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 28 9.5
>SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36)
Length = 330
Score = 71.3 bits (167), Expect = 8e-13
Identities = 30/85 (35%), Positives = 49/85 (57%)
Frame = -1
Query: 741 TTPEGFKVFKYMKILEEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEGYWVINAKEGKGKV 562
T +GFK +E+ ++ D ++KV+G+Y FK++ GP G EG WV++ K G G V
Sbjct: 166 TGKDGFKSAAVFDEIEKQIKKDGAKFVKKVKGVYCFKIQGGPGGKEGVWVVDVKSGNGSV 225
Query: 561 TYNGSEKPDVTFTISDEEWPILYPG 487
+ ++K D T T+ D ++ L G
Sbjct: 226 KFGANDKADCTITMKDNDFIQLMAG 250
>SB_28855| Best HMM Match : SCP2 (HMM E-Value=0.0011)
Length = 66
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 499 LISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAAGRI 380
+ G+LNP +AF GK+KI+G+M +AMKL L +Q ++
Sbjct: 27 MFKGQLNPTQAFMAGKLKIKGDMMVAMKLEKLMKQLKSKL 66
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = -3
Query: 499 LISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQ 395
+ G+LNP +AF GK+KI+G+M +AMKL L +Q
Sbjct: 232 MFKGQLNPTQAFMAGKLKIKGDMMVAMKLEKLMKQ 266
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = -3
Query: 502 DLIS---GKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAA 389
DLIS GK NPQ+ F +GK+K+ GN+ L MKL L + A
Sbjct: 675 DLISMATGKANPQQLFMKGKLKVAGNIMLTMKLNQLFKDYA 715
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 35.5 bits (78), Expect = 0.047
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Frame = -2
Query: 647 GSTVSRSETVQ--TAPRVTGSSMRKKAKGKSPTTALKNPT*PSRSATKSGRSYIR-ETEP 477
GS++ ++T T+P+ T + R + PTTA PT P A ++ + + E +P
Sbjct: 10 GSSLRSNKTPSKATSPKPTAPATRPTSTSTKPTTASTKPTSPPSQAARTRNTAEKPEEKP 69
Query: 476 --SEGVLPRKDQDPGQHGAGYEAD*FAASSRRQDRDDPI 366
S P PGQ G + + F S D DDP+
Sbjct: 70 ASSGAASPIPASKPGQPGKKFNINKF--DSLGFDEDDPL 106
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/75 (18%), Positives = 38/75 (50%)
Frame = -3
Query: 583 ERRQRESHLQRL*KTRRDLHDQRRRVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDL 404
E +Q++ + +L K ++ + D+R + D + + N + K+K++ + +
Sbjct: 972 ELQQQDEAIAKLQKAKKQVEDERTELEDHLQEEQNKVSHLTKTKLKLESTLDEVNLNLER 1031
Query: 403 QRQAAGRIETIRSKL 359
+++ G +E ++ KL
Sbjct: 1032 EKKVRGEVEKVKRKL 1046
>SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23)
Length = 684
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -2
Query: 680 PTRTT*SRKSAGSTVSRSETVQTA-PRVTGSSMRKKAKGKSPTTALKNPT*PSRSATKSG 504
P +T +K+ S + +T T P+V S +KK K+ ALKN S SAT S
Sbjct: 266 PGKTVKEKKTTSSLLKSPDTGATIKPKVKKSPAKKKHPKKAVAEALKNSKTKSPSATPSP 325
Query: 503 RSYIRETEPSEGVLPRKDQDPGQHGA 426
S ++ + +L + Q + A
Sbjct: 326 ISSPIKSPVTSPILSKAAQQTAKESA 351
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -2
Query: 671 TT*SRKSAGSTVSRSE-TVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSRSATKSGRSY 495
TT S+ +T RS+ + T P S+M G S TT ++ + + + TKSG S
Sbjct: 231 TTARSGSSATTTPRSDSSAMTTPGSGSSAMATPRSGSSATTTPRSDS-SAITTTKSGSS- 288
Query: 494 IRETEPSEGVLPRKDQDP 441
+ P +L R D P
Sbjct: 289 -SQITPIRNILKRSDSAP 305
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -2
Query: 743 RQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGK 564
+QP +++ T S K+P P TT + S + +T T P + ++
Sbjct: 249 KQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQPTTTQQTTAT 308
Query: 563 SPTTALKNPT*PSRSATKSGRSYIRETEPSEGVLP 459
PT + K PT S + + EP+E P
Sbjct: 309 LPTPSTK-PTTVSPTTRQPPPEPTEPLEPTEPTEP 342
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = -2
Query: 743 RQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGK 564
RQP +++ T S K+P +TT + S + +T T P + ++
Sbjct: 201 RQPTTNQQTTTTLPSTKQPTTTQQTTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQQTTTT 260
Query: 563 SPTTALKNPT*PSRSAT 513
P+T K PT P + T
Sbjct: 261 LPST--KQPTTPQLTTT 275
>SB_10508| Best HMM Match : SCP2 (HMM E-Value=9.1e-08)
Length = 153
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -1
Query: 675 QDNLIEKVRGIYGFKVRNGPDGAEGYWVINAKEGKGKVTYNGS--EKPDVTFTISDEEWP 502
++++ ++ G Y F + G +G G W+++ G + E PDVTF++S +E
Sbjct: 39 EEDMTSRIGGTYLFDI-TGENG--GTWIMDLSTVPGSIRATDKLVESPDVTFSMSVDEMV 95
Query: 501 ILYPGN*T 478
++ G T
Sbjct: 96 NIFYGQVT 103
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.9 bits (64), Expect = 2.4
Identities = 33/126 (26%), Positives = 55/126 (43%)
Frame = -2
Query: 752 RRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 573
R R + R++ S RS R +P R + R+ + SR ++ R S R +
Sbjct: 209 RSRSRTRRSRSRSRRSRSRSRDRRPRRRSRDRERSRERRSRRSRDKSRSREK-SRERGGS 267
Query: 572 KGKSPTTALKNPT*PSRSATKSGRSYIRETEPSEGVLPRKDQDPGQHGAGYEAD*FAASS 393
+G+S A K+P R + RS E + E + + D+D G+ E + S
Sbjct: 268 RGRS---AEKSPE-KQRDKSDDRRSRSPERKIKEDSVTKSDEDEGRSSERREKE--EKKS 321
Query: 392 RRQDRD 375
R +D+D
Sbjct: 322 RDKDKD 327
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -2
Query: 680 PTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT 534
PT+ SR+S +VS+S + + + SS +++ +SP ++PT
Sbjct: 1105 PTKPRPSRRSLSKSVSKSPSPARKGKRSSSSSSSRSRSRSPRRRKRSPT 1153
>SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 695 KRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKK 576
K P P R++ S+ S+ S SE QT RV S+ +KK
Sbjct: 291 KEPSSPARSSVESNSSSSSTSSSEKGQTEIRVHDSAEQKK 330
>SB_55319| Best HMM Match : Hexapep (HMM E-Value=0.16)
Length = 224
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 586 IDDPVTLGAVWTVSDLETVDPADFLDQVVLVGLHGLFKDLHVFEDL 723
+DD + V + D+E VD LD V +V L D+ V ED+
Sbjct: 168 LDDVDVVNGVTLLDDVEVVDGVTLLDDVDVVDGDTLLDDVDVVEDV 213
>SB_48762| Best HMM Match : Hexapep (HMM E-Value=0.3)
Length = 592
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 586 IDDPVTLGAVWTVSDLETVDPADFLDQVVLVGLHGLFKDLHVFEDL 723
+DD + V + D+ VD LD V +V L D+HV ED+
Sbjct: 397 LDDVDVVDGVTLLDDVVVVDGDPLLDDVDVVDGDTLMDDVHVVEDV 442
>SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3)
Length = 529
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -2
Query: 752 RRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSET-VQTAPRVTGSSMRKK 576
+RR P RSS + R P K R + R+ AGS + R T +T PR T +
Sbjct: 340 QRRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSALGRLTTKKKTPPRRTNLLEAFR 399
Query: 575 AKGKSPT 555
A +PT
Sbjct: 400 AAAGTPT 406
>SB_47787| Best HMM Match : DUF1556 (HMM E-Value=3.4)
Length = 382
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -2
Query: 677 TRTT*SRKSAGSTVSRSETVQTAPRVTGS--SMRKKAKGKSPTTALKN--PT*PSRSATK 510
+RTT R A S+V+ S T T R TGS S + G T +L N P+R +
Sbjct: 17 SRTTSERTVALSSVAHSSTRATISRPTGSYNSSHRTIPGTRGTRSLPNGPGPLPNRHSLN 76
Query: 509 SGRSYIRETEPSEGVLPRKDQDPGQHGAGY 420
+ +R SE RK ++ ++ + Y
Sbjct: 77 HDSNDVRFVAASEPHTTRKREETQRNSSLY 106
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = -2
Query: 752 RRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSET-VQTAPRVTGSSMRKK 576
+RR P RSS + R P K R + R+ AGS + R T +T PR T +
Sbjct: 471 QRRTPPSFTPRSSISRRRSDTPIKQRRISVPRRRAGSALGRLTTKKKTPPRRTNLLEAFR 530
Query: 575 AKGKSPTTALKNPT*PSRSATKSG-RSYIRETEP 477
A +P + + + + S + G RS + P
Sbjct: 531 AAAGTPAGSSNSSSSSTCSLSSPGMRSSVGSITP 564
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -2
Query: 656 KSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSRSATKSGRSYIRETEP 477
K + S V R++ +T+P +GS + + +SP+T PT SGR R+
Sbjct: 2225 KPSTSRVDRAQVSETSPSKSGSVPEEFSAVQSPSTDSSFPTYDEHEPKISGRD--RKRSF 2282
Query: 476 SEG 468
SEG
Sbjct: 2283 SEG 2285
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = -2
Query: 722 RSSNT*RSLKRPCKPTRTT*SRKSAGSTVSR----SETVQTAPRVTGSSMRKKAKGKSPT 555
RSSNT RSL R T +R+S+ +T S S T ++ R + ++ R + S T
Sbjct: 690 RSSNTTRSLTRRSSNTTRGHTRRSSNTTRSHTRRSSNTTRSLTRRSSNTTRSHTRRSSNT 749
Query: 554 T 552
T
Sbjct: 750 T 750
>SB_42806| Best HMM Match : MORN (HMM E-Value=0)
Length = 778
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -1
Query: 654 VRGI-YGFKVRNGPDGAE--GYWVINAKEGKGKVTYNGSEKPDVTFTISDE-EWPILYPG 487
V G+ +G+ V GA+ G W N K GKGK + + + TF ++P YP
Sbjct: 269 VNGLRHGYGVFTYASGAKYVGEWASNMKHGKGKYIFKNGQVFEGTFEQDHMLDFPDFYPS 328
Query: 486 N*T 478
T
Sbjct: 329 GMT 331
>SB_21892| Best HMM Match : Hexapep (HMM E-Value=3.8e-05)
Length = 462
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 586 IDDPVTLGAVWTVSDLETVDPADFLDQVVLVGLHGLFKDLHVFEDL 723
+DD + V + D++ VD LD+V +V L D+ V ED+
Sbjct: 133 LDDVDVVDGVTLLDDVDVVDGVTLLDEVDVVDGDPLLDDVDVVEDV 178
>SB_58895| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1838
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 653 SAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTA-LKNPT*PSRSATKSGRSYIRETEP 477
+AGS R+ V ++ RVT S KA +S T + T + S T+ R Y E
Sbjct: 1049 TAGSMSMRTSFVTSSTRVTSSPTTVKATSRSTRTKFVPRITRVTASPTREARQY--EVRL 1106
Query: 476 SEGVLP 459
S+G P
Sbjct: 1107 SDGKTP 1112
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -2
Query: 752 RRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAG-STVSRSETVQTAPRVTGSSMRKK 576
RRRR P RS + S +R P+R+ R+ S + E R R +
Sbjct: 128 RRRRSPSLERRSRSRSGSRERRRSPSRSPERRRERSFSNSPKRERHSPDHRNGNEGTRDR 187
Query: 575 AKGKSPTTALKNP 537
++ +SPT A +P
Sbjct: 188 SQSRSPTPAKADP 200
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 662 SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT--*PSRSATKSGRSYIR 489
++K ++ + + T T R +S K A GK+P + +PT SR AT+ S R
Sbjct: 682 TKKPRSTSAANTTTAPTQTRQKKTSAGKPAAGKNPIDSKGSPTSEKSSRPATRGRPSTGR 741
Query: 488 ETEPSEGVLPRKDQ 447
+PS P +D+
Sbjct: 742 --KPSAKSCPEQDK 753
>SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016)
Length = 606
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 624 NGPDGAEGYWVINAKEGKGKVTYNGSEKPDVTFTI 520
NG D +G N ++G G + +NG+ KP T T+
Sbjct: 333 NGNDNLQGNGNGN-QQGNGNLQWNGNGKPQATVTV 366
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 27.9 bits (59), Expect = 9.5
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -2
Query: 734 RKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA--KGKS 561
RK+ RS +T + R +R+ RKS + SRS + +P+ + S+ R ++ K +S
Sbjct: 199 RKSSRSPSTDKRKSRSRSRSRSRSHRKSRKRSESRSRS--RSPKKSRSARRSRSPQKSRS 256
Query: 560 PTTALKNPT*PSRSATKSGRSYIRETEPSEGVLPR 456
P + ++P S +S RS+ + S PR
Sbjct: 257 PQRS-RSPR--SSKRYRSSRSHRKHRSHSRSRSPR 288
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/90 (27%), Positives = 36/90 (40%)
Frame = -2
Query: 737 PRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSP 558
P + S + K P KP R SR S S SE+ ++ P + G S
Sbjct: 162 PTPSSSSESLPSGTKSPTKPLR---SRSSDELVKSNSESSKSNPVPRPRNRPPPPPGASR 218
Query: 557 TTALKNPT*PSRSATKSGRSYIRETEPSEG 468
++A K P+ + K RSY T +G
Sbjct: 219 SSASKEPSSSWGLSNKHQRSYSATTRARDG 248
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 532 DLHDQRRRVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAAGRIETIRSKL 359
++ D+R+R+ D I LN + F ++++ N+ L + TDLQ I T++ KL
Sbjct: 2730 EMRDKRKRLHDDIEKALNERDDFEDELLELKKNVKLDKEGTDLQ------INTLKEKL 2781
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = -2
Query: 749 RRRQPRKALRSSNT*RSLKRPCKPTR--TT*SRKSA---GSTVSRSETVQTAPRVTGSSM 585
+R Q + +R+ + R K P + +R + SRKS S V + VQ + S
Sbjct: 668 KREQEMERVRAEYS-RDSKEPARESRNLSNESRKSTQGESSNVHEARNVQDSRNPHSESR 726
Query: 584 RKKAKGKSPTTALKNPT*PSRSATKSGR 501
A+ ++P +NP SRS R
Sbjct: 727 VSDAESRNPHAESRNPRSESRSPRSESR 754
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,185,973
Number of Sequences: 59808
Number of extensions: 416776
Number of successful extensions: 1223
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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