Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10486
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 42 5e-04
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 39 0.003
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 36 0.024
U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases... 33 0.22
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 33 0.29
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 33 0.29
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 33 0.29
Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical pr... 31 0.68
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 1.2
AF016420-3|AAB65310.1| 291|Caenorhabditis elegans Serpentine re... 31 1.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 1.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 1.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 1.2
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 30 1.6
AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical... 30 1.6
Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 3.6
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 3.6
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 29 4.8
L25599-3|ABN43087.1| 570|Caenorhabditis elegans Hypothetical pr... 29 4.8
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = -3
Query: 502 DLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQA 392
D+ +GKLN QKAF GK+K++GN+ L KL + +A
Sbjct: 395 DIAAGKLNAQKAFMSGKLKVKGNVMLLQKLQTVLEKA 431
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = -3
Query: 499 LISGKLNPQKAFFQGKIKIQGNMGLAMKL 413
+ +GK+ P +AF QGK+K++GN+ AMKL
Sbjct: 77 IAAGKMKPDQAFMQGKMKLKGNIAKAMKL 105
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -1
Query: 642 YGFKVRNGPDGAEGYWVINAKEGKGKVTYNGSEKPDV 532
YGFK P GYW I K G GKVT+ +P V
Sbjct: 125 YGFKAAGTPGEIAGYWHIFKKFGSGKVTWKELVQPSV 161
>U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases,
short chain protein6 protein.
Length = 418
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -3
Query: 505 ADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQ 395
A L +GKL P A K++I G+M AMKL L R+
Sbjct: 376 APLFTGKLRPTTALMTKKLQISGDMPGAMKLESLLRK 412
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 32.7 bits (71), Expect = 0.29
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = -2
Query: 749 RRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 570
RR +PR RS R L R +R+ R+S R + + + S+ R + K
Sbjct: 178 RRERPRSPKRSREESRKLSRKPSSSRSKSPRRSREDP--RKVARKPSRSRSRSAERLRRK 235
Query: 569 GKSPTTALKNPT*PSRSATKSGRSYIRETEPSEGVLPRKDQDPGQH--GAGYEAD*FAAS 396
+SP + + P SRS ++S + + Q +H +G E++ S
Sbjct: 236 SRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDSSSGSESEHETRS 295
Query: 395 S-RRQDRDD 372
S RR++ DD
Sbjct: 296 SHRRRNSDD 304
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 32.7 bits (71), Expect = 0.29
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = -2
Query: 749 RRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 570
RR +PR RS R L R +R+ R+S R + + + S+ R + K
Sbjct: 178 RRERPRSPKRSREESRKLSRKPSSSRSKSPRRSREDP--RKVARKPSRSRSRSAERLRRK 235
Query: 569 GKSPTTALKNPT*PSRSATKSGRSYIRETEPSEGVLPRKDQDPGQH--GAGYEAD*FAAS 396
+SP + + P SRS ++S + + Q +H +G E++ S
Sbjct: 236 SRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDSSSGSESEHETRS 295
Query: 395 S-RRQDRDD 372
S RR++ DD
Sbjct: 296 SHRRRNSDD 304
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +3
Query: 114 FIKTNTYGNEFSLPIYYTFKFEREYFVIYLFFSYIKNKN--TYHLTEYVN 257
++K + N + PIY++F+ +R + + LFF++ +N N HL+E VN
Sbjct: 922 YLKFDDVKNVLNAPIYFSFRTDRTHAL--LFFAHDQNNNFLQVHLSEEVN 969
>Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical
protein R05D11.8 protein.
Length = 566
Score = 31.5 bits (68), Expect = 0.68
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = -2
Query: 749 RRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 570
++ QP SSN+ + K +T S S S+ + S + R S +K AK
Sbjct: 71 QKSQPLPVQNSSNSVNKQRPLKKSAESTVSSTSTASSSASSVPDSSRNRSVAVSPQKSAK 130
Query: 569 GKSPTTALKNPT*PSRSATKSGRSYIRETEPSEGVLPRKD--QDPGQHGAGYEAD*FAAS 396
G+S P + AT + + + PS+ L +K Q P +G + A+ +A+
Sbjct: 131 GRS----------PKKFATNVEKLFEHHSTPSKLTLAKKQSRQSPMHNGFSHTAEEISAT 180
Query: 395 SRRQDRD 375
Q D
Sbjct: 181 PHFQSFD 187
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = -2
Query: 755 GRRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAP-RVTGSSMRK 579
G + P++ +S T + + ++ ++ + S+ ++ E ++P + TG +++
Sbjct: 1401 GEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKE 1460
Query: 578 KAKGKSPTTALKNPT*PS--RSATKSGRS 498
K+ KSPT K+P P +S K +S
Sbjct: 1461 KSPPKSPTKKEKSPEKPEDVKSPVKKEKS 1489
>AF016420-3|AAB65310.1| 291|Caenorhabditis elegans Serpentine
receptor, class sx protein13 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 165 TFKFEREYFVIYLFFSYIKNKNTYHLTEYVNHEYK 269
T K+E+ F FF + N NT+++T + + EY+
Sbjct: 233 TVKWEKMLFTHNAFFIVLSNSNTFYVTMWKSEEYR 267
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = -2
Query: 755 GRRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAP-RVTGSSMRK 579
G + P++ +S T + + ++ ++ + S+ ++ E ++P + TG +++
Sbjct: 1401 GEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKE 1460
Query: 578 KAKGKSPTTALKNPT*PS--RSATKSGRS 498
K+ KSPT K+P P +S K +S
Sbjct: 1461 KSPPKSPTKKEKSPEKPEDVKSPVKKEKS 1489
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = -2
Query: 755 GRRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAP-RVTGSSMRK 579
G + P++ +S T + + ++ ++ + S+ ++ E ++P + TG +++
Sbjct: 1401 GEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKE 1460
Query: 578 KAKGKSPTTALKNPT*PS--RSATKSGRS 498
K+ KSPT K+P P +S K +S
Sbjct: 1461 KSPPKSPTKKEKSPEKPEDVKSPVKKEKS 1489
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = -2
Query: 755 GRRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAP-RVTGSSMRK 579
G + P++ +S T + + ++ ++ + S+ ++ E ++P + TG +++
Sbjct: 1401 GEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKE 1460
Query: 578 KAKGKSPTTALKNPT*PS--RSATKSGRS 498
K+ KSPT K+P P +S K +S
Sbjct: 1461 KSPPKSPTKKEKSPEKPEDVKSPVKKEKS 1489
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = -2
Query: 752 RRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTV----SRSETVQTAPRVTGSSM 585
RR R PR+ R+ RS R K +R + SR S+ S SR + +P
Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRRRSESRSPSPKRDLK 148
Query: 584 RKKAKGKSPTTALKNPT*PSRSATKSG 504
R+ ++ +SP A S S K+G
Sbjct: 149 REASRSRSPLPAKDRSRTRSGSPPKNG 175
>AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.13 protein.
Length = 165
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = -2
Query: 758 CGRRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 579
CG A RSS+ SL RP P S +S S + S + T SS
Sbjct: 77 CGSAGTSTVSATRSSHCSVSLPRPSSP-----SIRSNSSVPTASGGARNGSPSTRSSTSS 131
Query: 578 KAKGK--SPTTALKNPT*PSRS 519
+G +PTT+ PT PS S
Sbjct: 132 SIQGSPIAPTTSASQPTRPSDS 153
>Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical
protein K02E11.7 protein.
Length = 135
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = -1
Query: 750 PSPTTPEGF-KVFKYMKILEEAMQTDQDNLIEKVRGIYG---FKVRNGPDGAE-GYWV-- 592
P P+TP F + + ++ ++E G+ ++V NG + GYW
Sbjct: 25 PGPSTPRPILAAFNDNVTIPMPISSNYRRIVEPTYGVKEEQLYRVCNGKNKKTCGYWENI 84
Query: 591 -INAKEGKGKVTYNGSEKPDVTFTISDEEWPILYPGN 484
AK GK TYN ++K + I ++ + Y GN
Sbjct: 85 QTKAKVVAGKTTYNKNKKALIIKQILKTDFGMYYTGN 121
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -2
Query: 716 SNT*RSLKRPCKPTRT---T*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTAL 546
S T L +P + T T T S S ++ S S + T+ + S++ + + TTA
Sbjct: 74 STTPERLTKPYEETDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTTTAT 133
Query: 545 KNPT*PSRSATKSGR 501
PT S++ T S +
Sbjct: 134 STPTSSSKATTTSAQ 148
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = -2
Query: 584 RKKAKGKSPTTALKNPT*PSRSATKSGRSYIRETEPSEGVLPRKDQDPGQHGAGYEAD*F 405
R ++ +S + + +N SRSA+KS + RE E S PR G G G
Sbjct: 4 RSRSNSRSQSRSRENSRGRSRSASKSPVYHRRERESSRSRSPRARYGGGGGGGGGGG--- 60
Query: 404 AASSRRQDRDDP 369
+++ DR++P
Sbjct: 61 RGRNQQYDRENP 72
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = -2
Query: 677 TRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSRSATKSGRS 498
T +T S S GST S T TGSS+ G S +T + S S++ +G+S
Sbjct: 818 TVSTGSTSSPGSTESTVSGASTMSPSTGSSVETSTSGSSVSTVSQ-----STSSSTTGQS 872
Query: 497 YIRETEPS 474
+ E+ S
Sbjct: 873 TVSESSVS 880
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -2
Query: 689 PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSRSAT 513
P PT T + KS +T + T+++ P + K+ +PTT PT P+ T
Sbjct: 247 PTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTT 304
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -2
Query: 689 PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSRSAT 513
P PT T + KS +T + T+++ P + K+ +PTT PT P+ T
Sbjct: 361 PTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTT 418
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 28.7 bits (61), Expect = 4.8
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -2
Query: 755 GRRRRQPRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKK 576
GRR + RS KR +R S S+ SRS + +++ R + K
Sbjct: 110 GRRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSK 169
Query: 575 AKGKSPTTALKNPT---*PSRSATKSGRSYIRE 486
A+G+ +TA K P SRS K RS R+
Sbjct: 170 ARGRRASTAKKTPAKRRSRSRSQQKVKRSMSRK 202
>L25599-3|ABN43087.1| 570|Caenorhabditis elegans Hypothetical
protein F54H12.8 protein.
Length = 570
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = -2
Query: 575 AKGKSPTTALKNPT*PSRSATKSGRSYIRETEPS-EGVLPRKDQ-DPGQHGAGYEAD*FA 402
+ G SPTT T S +T S T+ S +LP DPG + Y +
Sbjct: 46 SSGASPTTP--ETTISSSDSTNESSSITSSTDSSTNSMLPETSTIDPGSQSSSYSGNSLT 103
Query: 401 ASSRRQDRDDP 369
ASS D P
Sbjct: 104 ASSTTSDPSIP 114
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -2
Query: 704 RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT--- 534
RS KR +R S S+ SRS + +++ R + KA+G+ +TA K P
Sbjct: 127 RSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRRRSSSKARGRRASTAKKTPAKRR 186
Query: 533 *PSRSATKSGRSYIRE 486
SRS K RS R+
Sbjct: 187 SRSRSQQKVKRSMSRK 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,830,520
Number of Sequences: 27780
Number of extensions: 328627
Number of successful extensions: 1080
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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