Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10485
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 102 8e-22
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 102 8e-22
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 102 8e-22
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 102 8e-22
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 102 8e-22
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 100 3e-21
M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and DNA-dam... 34 0.34
L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein. 34 0.34
BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and DNA-d... 34 0.34
AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and DNA-d... 34 0.34
AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and DNA-d... 34 0.34
BC034968-1|AAH34968.1| 538|Homo sapiens jub, ajuba homolog (Xen... 29 9.5
BC007580-1|AAH07580.1| 538|Homo sapiens JUB protein protein. 29 9.5
AY169959-1|AAO37641.1| 538|Homo sapiens ajuba protein. 29 9.5
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 102 bits (244), Expect = 8e-22
Identities = 41/59 (69%), Positives = 53/59 (89%)
Frame = +3
Query: 255 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 431
EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 101 bits (242), Expect = 1e-21
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = +1
Query: 61 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 240
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 241 QALCKNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 354
+ALC + + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 102 bits (244), Expect = 8e-22
Identities = 41/59 (69%), Positives = 53/59 (89%)
Frame = +3
Query: 255 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 431
EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 101 bits (242), Expect = 1e-21
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = +1
Query: 61 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 240
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 241 QALCKNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 354
+ALC + + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 102 bits (244), Expect = 8e-22
Identities = 41/59 (69%), Positives = 53/59 (89%)
Frame = +3
Query: 255 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 431
EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 101 bits (242), Expect = 1e-21
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = +1
Query: 61 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 240
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 241 QALCKNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 354
+ALC + + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 102 bits (244), Expect = 8e-22
Identities = 41/59 (69%), Positives = 53/59 (89%)
Frame = +3
Query: 255 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 431
EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 101 bits (242), Expect = 1e-21
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = +1
Query: 61 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 240
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 241 QALCKNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 354
+ALC + + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 102 bits (244), Expect = 8e-22
Identities = 41/59 (69%), Positives = 53/59 (89%)
Frame = +3
Query: 255 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 431
EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 101 bits (242), Expect = 1e-21
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = +1
Query: 61 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 240
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 241 QALCKNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 354
+ALC + + ++ K L + ++ R + K+
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 100 bits (239), Expect = 3e-21
Identities = 40/59 (67%), Positives = 52/59 (88%)
Frame = +3
Query: 255 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 431
EHQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 94.3 bits (224), Expect = 2e-19
Identities = 50/98 (51%), Positives = 61/98 (62%)
Frame = +1
Query: 61 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 240
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 241 QALCKNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 354
+AL + + ++ K L + ++ R K+
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKV 103
>M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible protein protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 85 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 219
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 85 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 219
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 85 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 219
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 85 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 219
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 85 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 219
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>BC034968-1|AAH34968.1| 538|Homo sapiens jub, ajuba homolog
(Xenopus laevis) protein.
Length = 538
Score = 29.1 bits (62), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 357 RQFSLPCHPCQSCRDQPILQAFCCCQP 277
R + C+ C+ CR Q + CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513
>BC007580-1|AAH07580.1| 538|Homo sapiens JUB protein protein.
Length = 538
Score = 29.1 bits (62), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 357 RQFSLPCHPCQSCRDQPILQAFCCCQP 277
R + C+ C+ CR Q + CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513
>AY169959-1|AAO37641.1| 538|Homo sapiens ajuba protein.
Length = 538
Score = 29.1 bits (62), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 357 RQFSLPCHPCQSCRDQPILQAFCCCQP 277
R + C+ C+ CR Q + CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,963,128
Number of Sequences: 237096
Number of extensions: 1478561
Number of successful extensions: 3511
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3508
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -