Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10484
         (482 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023387-1|AAY55803.2|  391|Drosophila melanogaster IP10444p pro...    32   0.36 
BT023327-1|AAY55743.1|  399|Drosophila melanogaster IP10544p pro...    32   0.36 
AE014298-2630|AAF48779.1|  370|Drosophila melanogaster CG12985-P...    32   0.36 
X77532-1|CAA54670.1|  450|Drosophila melanogaster serum response...    31   0.63 
AY095071-1|AAM11399.1|  449|Drosophila melanogaster RE17834p pro...    31   0.63 
AE013599-3853|AAF47195.1|  449|Drosophila melanogaster CG3411-PA...    31   0.63 
BT025937-1|ABG02181.1|  520|Drosophila melanogaster IP13955p pro...    30   1.4  
AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA...    29   2.5  
AY119569-1|AAM50223.1|  131|Drosophila melanogaster HL07933p pro...    29   3.3  
AF154418-1|AAD38397.1|  131|Drosophila melanogaster anoxia upreg...    29   3.3  
AE014297-1193|AAF54551.1|  131|Drosophila melanogaster CG6544-PC...    29   3.3  

>BT023387-1|AAY55803.2|  391|Drosophila melanogaster IP10444p
           protein.
          Length = 391

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -3

Query: 321 CGYKRGFRNGVRS*DRLGAGRERDAKRDKSSGGKWCRRAG---GRCWWTSRSSLRDRRGC 151
           C  +  +++G  S D     RE+D   D+  G  W R  G    R     R+++RDR  C
Sbjct: 71  CTTRPSYQSGCESMDESARDREKDRNIDRDRGRDWDRNRGCDRNRDRDKDRNNIRDRDNC 130


>BT023327-1|AAY55743.1|  399|Drosophila melanogaster IP10544p
           protein.
          Length = 399

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -3

Query: 321 CGYKRGFRNGVRS*DRLGAGRERDAKRDKSSGGKWCRRAG---GRCWWTSRSSLRDRRGC 151
           C  +  +++G  S D     RE+D   D+  G  W R  G    R     R+++RDR  C
Sbjct: 79  CTTRPSYQSGCESMDESARDREKDRNIDRDRGRDWDRNRGCDRNRDRDKDRNNIRDRDNC 138


>AE014298-2630|AAF48779.1|  370|Drosophila melanogaster CG12985-PA
           protein.
          Length = 370

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -3

Query: 321 CGYKRGFRNGVRS*DRLGAGRERDAKRDKSSGGKWCRRAG---GRCWWTSRSSLRDRRGC 151
           C  +  +++G  S D     RE+D   D+  G  W R  G    R     R+++RDR  C
Sbjct: 50  CTTRPSYQSGCESMDESARDREKDRNIDRDRGRDWDRNRGCDRNRDRDKDRNNIRDRDNC 109


>X77532-1|CAA54670.1|  450|Drosophila melanogaster serum response
           factor homolog protein.
          Length = 450

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 41  PALGGQRPASAHYVQQHGGAPHRQRP 118
           PALG  RP S   +Q  GG P  QRP
Sbjct: 33  PALGAGRPPSGGLLQNMGGVPPMQRP 58


>AY095071-1|AAM11399.1|  449|Drosophila melanogaster RE17834p
           protein.
          Length = 449

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 41  PALGGQRPASAHYVQQHGGAPHRQRP 118
           PALG  RP S   +Q  GG P  QRP
Sbjct: 33  PALGAGRPPSGGLLQNMGGVPPMQRP 58


>AE013599-3853|AAF47195.1|  449|Drosophila melanogaster CG3411-PA
           protein.
          Length = 449

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +2

Query: 41  PALGGQRPASAHYVQQHGGAPHRQRP 118
           PALG  RP S   +Q  GG P  QRP
Sbjct: 33  PALGAGRPPSGGLLQNMGGVPPMQRP 58


>BT025937-1|ABG02181.1|  520|Drosophila melanogaster IP13955p
           protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 261 RERDAKRDKSSGGKWCRRAGGRCWWTSRSSLRDRRGCWS 145
           R  D  +      KW R+  G+CWW  R   R  +  WS
Sbjct: 5   RSEDEGKKLKRKSKW-RQLFGQCWWKKRRRQRSYQDYWS 42


>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
           protein.
          Length = 1218

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +2

Query: 35  HEPALGGQRPASAHYVQQHGGAPHRQRPR 121
           H P  GG           HGG PH Q+PR
Sbjct: 457 HHPHHGGAGSGGGSGPGSHGGQPHHQKPR 485


>AY119569-1|AAM50223.1|  131|Drosophila melanogaster HL07933p
           protein.
          Length = 131

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
 Frame = +3

Query: 66  PQRTTYSNTVER--RXXXXXXXXXXXXERXXXXXXXXXXXXXXXXXXRLPYGTTYRHYSY 239
           P+R+TY++TVE+  R                                 LP GT YRH+SY
Sbjct: 70  PERSTYTSTVEKTSRSGPGGSYNYSTERTSTTGAGPGGYSYSSTTSGNLPGGTKYRHFSY 129

Query: 240 RV 245
            V
Sbjct: 130 HV 131


>AF154418-1|AAD38397.1|  131|Drosophila melanogaster anoxia
           upregulated protein protein.
          Length = 131

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
 Frame = +3

Query: 66  PQRTTYSNTVER--RXXXXXXXXXXXXERXXXXXXXXXXXXXXXXXXRLPYGTTYRHYSY 239
           P+R+TY++TVE+  R                                 LP GT YRH+SY
Sbjct: 70  PERSTYTSTVEKTSRSGPGGSYNYSTERTSTTGAGPGGYSYSSTTSGNLPGGTKYRHFSY 129

Query: 240 RV 245
            V
Sbjct: 130 HV 131


>AE014297-1193|AAF54551.1|  131|Drosophila melanogaster CG6544-PC,
           isoform C protein.
          Length = 131

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
 Frame = +3

Query: 66  PQRTTYSNTVER--RXXXXXXXXXXXXERXXXXXXXXXXXXXXXXXXRLPYGTTYRHYSY 239
           P+R+TY++TVE+  R                                 LP GT YRH+SY
Sbjct: 70  PERSTYTSTVEKTSRSGPGGSYNYSTERTSTTGAGPGGYSYSSTTSGNLPGGTKYRHFSY 129

Query: 240 RV 245
            V
Sbjct: 130 HV 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,483,209
Number of Sequences: 53049
Number of extensions: 191747
Number of successful extensions: 624
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)