Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10483
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   1.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   4.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 410 VYVLRKVLVFFCF*LLISFVVY 345
           V+ L  +L+FF F L I  +VY
Sbjct: 236 VFFLGSILIFFIFPLAILIIVY 257


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 151 PDFKPKTPFGQMPVLVIDGK 210
           P+ KP+TPF    +L ++ K
Sbjct: 114 PNRKPRTPFTTQQLLALEKK 133


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 539 PDLEVQYPAFKKVLQSVLTQPKVKAFLDLG 628
           P+L+V    F+       T PKVK  + +G
Sbjct: 73  PELDVDQNGFRNFTNLKKTHPKVKLQVAVG 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,103
Number of Sequences: 336
Number of extensions: 2892
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)