Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10483
         (707 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30870.1 68415.m03762 glutathione S-transferase, putative sup...    34   0.11 
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ...    31   0.75 
At4g28910.2 68417.m04132 expressed protein                             30   1.3  
At4g28910.1 68417.m04131 expressed protein                             30   1.3  
At1g02940.1 68414.m00261 glutathione S-transferase, putative sim...    30   1.3  
At4g10130.1 68417.m01657 DNAJ heat shock N-terminal domain-conta...    29   4.0  
At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative / ...    29   4.0  
At2g30860.1 68415.m03761 glutathione S-transferase, putative ide...    28   5.3  
At5g41220.1 68418.m05009 glutathione S-transferase, putative sim...    28   7.0  
At1g75270.1 68414.m08744 dehydroascorbate reductase, putative si...    27   9.2  
At1g74590.1 68414.m08640 glutathione S-transferase, putative sim...    27   9.2  

>At2g30870.1 68415.m03762 glutathione S-transferase, putative
           supported by cDNA GI:443698 GB:D17673
          Length = 215

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 151 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRNTGSPGP 273
           P++    PFG++PVLV    +  +S AI RY+     S GP
Sbjct: 42  PEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGP 82


>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
           eEF-1B gamma, putative similar to elongation factor 1B
           gamma GI:3868758 from [Oryza sativa]
          Length = 413

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 151 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRNTG 261
           P+F    P G++PVL        +S AI RY+ R  G
Sbjct: 43  PEFLKMNPIGKVPVLETPEGPIFESNAIARYVSRKNG 79


>At4g28910.2 68417.m04132 expressed protein
          Length = 425

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/75 (26%), Positives = 38/75 (50%)
 Frame = +3

Query: 180 SDASISDRRQAVRSEHRHLQVPRPQYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEA 359
           ++A  S +   V  E R     + ++G  G ND++  E D +   +H+ + KA+ V    
Sbjct: 93  TEAEASTKPLWVEDESRKEAGNKRKFGFPGMNDDKKKEKDSSHVDMHEKKTKASHVSTAT 152

Query: 360 DEELKAKKHEDFSKN 404
           DE   A ++ED +++
Sbjct: 153 DEGSTA-ENEDVAES 166


>At4g28910.1 68417.m04131 expressed protein
          Length = 425

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/75 (26%), Positives = 38/75 (50%)
 Frame = +3

Query: 180 SDASISDRRQAVRSEHRHLQVPRPQYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEA 359
           ++A  S +   V  E R     + ++G  G ND++  E D +   +H+ + KA+ V    
Sbjct: 93  TEAEASTKPLWVEDESRKEAGNKRKFGFPGMNDDKKKEKDSSHVDMHEKKTKASHVSTAT 152

Query: 360 DEELKAKKHEDFSKN 404
           DE   A ++ED +++
Sbjct: 153 DEGSTA-ENEDVAES 166


>At1g02940.1 68414.m00261 glutathione S-transferase, putative
           similar to glutathione S-transferase GI:860955 from
           [Hyoscyamus muticus]
          Length = 256

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 151 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYL 246
           P F    PFGQ+PV +  G +  +S AI  Y+
Sbjct: 79  PSFLAINPFGQVPVFLDGGLKLTESRAISEYI 110


>At4g10130.1 68417.m01657 DNAJ heat shock N-terminal
           domain-containing protein low similarity to SP|Q9QYI7
           DnaJ homolog subfamily B member 8 Mus musculus,
           SP|P50025 Chaperone protein dnaJ Legionella pneumophila;
           contains Pfam profile PF00226 DnaJ domain
          Length = 174

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +3

Query: 171 SVRSDASISDRRQAVRSEHRHLQVPRPQYGLAGANDEEAF-EIDQNVEFLHDIRAKAAAV 347
           SV+ DAS  + R + RS   H    +       ++D+E F +I +  E L D  A+   V
Sbjct: 17  SVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSSSDDEKFLKIQKAWEVLSD--AELRVV 74

Query: 348 YYEADEELKAKKHE 389
           Y   D +L++ +H+
Sbjct: 75  Y---DNDLRSSRHD 85


>At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative /
           eEF-1B gamma, putative Similar to elongation factor
           1-gamma (gb|EF1G_XENLA). ESTs
           gb|T20564,gb|T45940,gb|T04527 come from this gene
          Length = 414

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 151 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRNTG 261
           P F    P G++PVL        +S AI RY+ R  G
Sbjct: 43  PAFLKMNPIGKVPVLETPEGSVFESNAIARYVSRLNG 79


>At2g30860.1 68415.m03761 glutathione S-transferase, putative
           identical to GB:Y12295
          Length = 215

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 151 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRNTGSPGP 273
           P +    PFG +P +V    +  +S A+ RY+     S GP
Sbjct: 42  PAYLALQPFGTVPAVVDGDYKIFESRAVMRYVAEKYRSQGP 82


>At5g41220.1 68418.m05009 glutathione S-transferase, putative
           similar to emb|CAA10662
          Length = 590

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +1

Query: 151 PDFKPKTPFGQMPVLVIDGK-QYAQSTAICRYL 246
           P+FK   P G++P  ++DGK + ++S AI  YL
Sbjct: 43  PEFKDINPMGKVPA-IVDGKLKLSESHAILIYL 74


>At1g75270.1 68414.m08744 dehydroascorbate reductase, putative
           similar to GI:6939839 from [Oryza sativa]
          Length = 213

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 118 FEDHRVLSADWPD-FKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRNTGSP 267
           ++ H +  +D P  F   +P G++PV+ +DGK  A S  I   L      P
Sbjct: 37  YKTHLINVSDKPQWFLDISPEGKVPVVKLDGKWVADSDVIVGLLEEKYPEP 87


>At1g74590.1 68414.m08640 glutathione S-transferase, putative
           similar to putative glutathione S-transferase
           GB:CAA10060 [Arabidopsis thaliana]; contains Pfam
           profile: PF00043 Glutathione S-transferases
          Length = 232

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 181 QMPVLVIDGKQYAQSTAICRYLGRN-TGSP 267
           ++PVLV DGK  A+S  I  Y+    T SP
Sbjct: 56  KIPVLVHDGKPVAESLVILEYIDETWTNSP 85


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,460,115
Number of Sequences: 28952
Number of extensions: 258144
Number of successful extensions: 695
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)