Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10481
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.1  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 129 AKTGQYSEDKAFKKF-VLCFFNKSAILNSDGTLNMDVALENFLW 257
           A  G ++E+     +  LC F+K+ I+  D T  +    ++ LW
Sbjct: 279 APPGDFTENMGTLGYNELCEFHKNGIIEWDDTQKVPYLYDDTLW 322


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 272  KPKAY*NSARIRPGKT 319
            KPK Y  SA + P KT
Sbjct: 1552 KPKGYLLSAAVSPSKT 1567


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 297 ALF*YALGFRFINTRGSFLAQHPCSVYHLSSRLR 196
           AL  +  GF  ++T  SF+A    +  H+  +L+
Sbjct: 273 ALLFFFAGFETVSTGVSFMAYELATNPHVQKKLQ 306


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 160 ALSSEYCPVFAAFITSVLTPDSLTHSE 80
           AL  +Y P   AF+ +   PDS+   E
Sbjct: 191 ALKIKYNPFAKAFLDAKERPDSIYQRE 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,984
Number of Sequences: 336
Number of extensions: 2093
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)