Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10480X
(538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 150 8e-37
03_01_0547 + 4093196-4093657,4094267-4095148 150 8e-37
03_01_0544 + 4082528-4082989,4083585-4084466 150 8e-37
03_01_0543 + 4076981-4077442,4078145-4079026 150 8e-37
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 101 5e-22
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 97 1e-20
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 96 2e-20
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 96 2e-20
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 95 2e-20
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 71 6e-13
02_04_0462 + 23131433-23132836 67 1e-11
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 36 0.020
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 36 0.027
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 34 0.062
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 33 0.19
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 32 0.25
03_05_0511 + 25056018-25059107 32 0.33
02_04_0148 - 20198407-20201424 31 0.44
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.44
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.58
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.58
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 31 0.58
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.77
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 1.0
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.0
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 30 1.3
01_06_0662 + 30987187-30987277,30987825-30990214 30 1.3
11_01_0185 + 1455635-1455817,1455997-1456051,1456415-1456611,145... 29 1.8
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 1.8
01_01_0016 - 88825-90411 29 2.3
05_04_0116 + 18131510-18133192 28 4.1
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 5.4
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 5.4
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 27 7.2
08_02_0216 + 14390739-14390847,14390983-14391017,14391112-143911... 27 7.2
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 27 7.2
07_03_0398 - 17690979-17690998,17691034-17691446,17691709-176917... 27 9.5
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 150 bits (363), Expect = 8e-37
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREH
Sbjct: 77 LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEP 506
ALLAFTLGVKQ+I NKMD+T P
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTP 160
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG*RFF 190
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ R F
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 54
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 150 bits (363), Expect = 8e-37
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREH
Sbjct: 77 LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEP 506
ALLAFTLGVKQ+I NKMD+T P
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTP 160
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG*RFF 190
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ R F
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 54
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 150 bits (363), Expect = 8e-37
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREH
Sbjct: 77 LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEP 506
ALLAFTLGVKQ+I NKMD+T P
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTP 160
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG*RFF 190
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ R F
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 54
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 150 bits (363), Expect = 8e-37
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREH
Sbjct: 77 LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEP 506
ALLAFTLGVKQ+I NKMD+T P
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTP 160
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG*RFF 190
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ R F
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 54
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 101 bits (241), Expect = 5e-22
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +3
Query: 264 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 443
FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LL
Sbjct: 26 FETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLL 85
Query: 444 AFTLGVKQLIVGVNKMDST 500
A TLGV +L+V +NKMD +
Sbjct: 86 AKTLGVSKLVVVINKMDES 104
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +3
Query: 264 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHA 437
F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+
Sbjct: 307 FDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHS 366
Query: 438 LLAFTLGVKQLIVGVNKMDSTE 503
L + GV LIV VNKMDS E
Sbjct: 367 QLVRSFGVDNLIVVVNKMDSVE 388
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = +3
Query: 267 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTRE 431
ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+E
Sbjct: 321 ETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKE 380
Query: 432 HALLAFTLGVKQLIVGVNKMDS 497
HA L + GV+QLIV VNKMD+
Sbjct: 381 HAQLIRSFGVEQLIVAVNKMDA 402
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 44 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG 178
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E G
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKG 290
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = +3
Query: 267 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTRE 431
ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+E
Sbjct: 321 ETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKE 380
Query: 432 HALLAFTLGVKQLIVGVNKMDS 497
HA L + GV+QLIV VNKMD+
Sbjct: 381 HAQLIRSFGVEQLIVAVNKMDA 402
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 44 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG 178
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E G
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKG 290
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 95.5 bits (227), Expect = 2e-20
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +3
Query: 264 FETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 431
FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G K GQTRE
Sbjct: 67 FETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTRE 126
Query: 432 HALLAFTLGVKQLIVGVNKMDSTEPPTV 515
H LLA TLGV +LIV +NKMD PTV
Sbjct: 127 HVLLAKTLGVAKLIVVINKMDE---PTV 151
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +2
Query: 77 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE 172
D+GKST G +++ G +D RTI+K+EKEA++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKD 35
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 70.9 bits (166), Expect = 6e-13
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +3
Query: 261 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 440
++ET+K + +D PGH D++KNMITG +Q D +L+V+A G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
Query: 441 LAFTLGVKQLIVGVNKMDSTEPP 509
LA +GV L+ +NK+D+ + P
Sbjct: 177 LARQVGVPSLVCFLNKVDAVDDP 199
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 35 KEKTHINIVVIGHVDSGKSTTT 100
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLT 84
>02_04_0462 + 23131433-23132836
Length = 467
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +3
Query: 261 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 440
++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 127 EYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 179
Query: 441 LAFTLGVKQLIVGVNKMDSTE 503
LA +GV +++V +NK D +
Sbjct: 180 LAKQVGVPKIVVFLNKKDQVD 200
Score = 35.9 bits (79), Expect = 0.020
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 26 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 160
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE 107
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +3
Query: 282 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 461
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRL 202
Query: 462 KQLIVGVNKMD 494
+ +I+ NK+D
Sbjct: 203 QHIIILQNKID 213
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 35.5 bits (78), Expect = 0.027
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 249 YCLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 428
YC W + Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 130 YCTW----NGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 185
Query: 429 EHAL 440
+ +
Sbjct: 186 RYEI 189
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCGGI 130
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 34.3 bits (75), Expect = 0.062
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 446
+ Y + +ID PGH DF + + A+L+V A G QT + LA
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG-------VQAQTIANFYLA 182
Query: 447 FTLGVKQLIVGVNKMDSTEPPTVSPD 524
F + +I +NK+D PT PD
Sbjct: 183 FESNL-SIIPVINKIDQ---PTADPD 204
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 136
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 285 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 464
+T +D PGH F G + D VL+VAA G + + HA A
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTL----EAMSHAKAANV---- 298
Query: 465 QLIVGVNKMDST 500
++V VNK D +
Sbjct: 299 PIVVAVNKCDKS 310
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 279 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 389
Y I+D PGH +F M AD AVL+V A G
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.33
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCG 124
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 285 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 389
V +ID+PGH DF + + +D A+++V A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 285 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 389
V +ID+PGH DF + AD A+++V A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQ 169
N ++ HVD GK++ HLI G ++R E+ A+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSAR 55
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCG 124
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +3
Query: 285 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 464
+ ++D PGH DF + + AVL+V AG G QT+ A G++
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPL-------AQTKFVLSKALKYGLR 177
Query: 465 QLIVGVNKMDSTEPPTVSPD 524
+++ +NK+D P+VS +
Sbjct: 178 PILL-LNKVDR---PSVSEE 193
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 2 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 124
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 273 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 374
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 2 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 124
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 273 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 374
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 31.1 bits (67), Expect = 0.58
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 279 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 458
Y + +ID PGH DF + + + A+L+V A G EA QT + LA
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYLALEND 195
Query: 459 VKQLIVGVNKMD--STEPPTVSPDLRK 533
+ ++I +NK+D EP V+ ++ +
Sbjct: 196 L-EIIPVLNKIDLPGAEPDRVAQEIEE 221
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 151
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 0.77
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 47 HINIVVIGHVDSGKSTTTGHLIYKCG 124
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 124
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 261 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 374
K + + Y + +ID+PGH DF + D A+++V
Sbjct: 92 KRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 291 IIDAPGHRDFIKNMITGTSQADCAVLIV 374
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +3
Query: 291 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 470
+ID PGH F G S D AV++V + G+ K QT E L V+ +
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV-----DIMHGLEK--QTVETLALLKDRNVRFI 559
Query: 471 IVGVNKMD 494
+V +NK+D
Sbjct: 560 VV-LNKVD 566
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 124
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 273 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 374
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>11_01_0185 +
1455635-1455817,1455997-1456051,1456415-1456611,
1456850-1457206,1457355-1457424,1457527-1457672,
1457786-1457831,1457910-1457962,1458507-1458651,
1459268-1459386,1459494-1459565,1459872-1459975,
1460117-1460173,1460260-1460452,1460535-1460678,
1460825-1460927,1461444-1461592,1462674-1462728,
1464037-1464227,1464580-1464701,1464831-1464978,
1465354-1465423,1465499-1465644,1466097-1466247,
1466614-1466732,1466807-1466848,1466849-1466961,
1467496-1467552,1467642-1467834,1468040-1468183,
1468567-1468665
Length = 1280
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -3
Query: 320 EISVSRSINDGNIVLASFELPEAISIVIPLNVNP*VCPFPSII 192
E++VS + +DG+ LAS +P + I N VCPFP ++
Sbjct: 166 ELTVSLTSSDGSQNLASTTIPLVPFLSILGQENKDVCPFPLVL 208
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 291 IIDAPGHRDFIKNMITGTSQADCAVLIV 374
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 476 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 357
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>05_04_0116 + 18131510-18133192
Length = 560
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -1
Query: 523 SGLTVGGSVE-SILFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPA---ATMSTAQ 356
SG GGS+ S+ P S T V S P + PA+ +P PA ATM+ AQ
Sbjct: 69 SGEGQGGSMSLSLQLRPLGSTPTAAVAVSVPPMAAAPMMAGPAAAAPAPAPPLATMAVAQ 128
Query: 355 SA 350
+A
Sbjct: 129 NA 130
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 41 KTHINIVVIGHVDSG 85
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 407 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 273
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 392 FTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPEAI 249
+TG + +S G + V+D+ V + INDG + + ELP A+
Sbjct: 578 YTGQSIFFGGPILSTSGR-NVVIDQDDVPKVINDGITIAKAIELPNAV 624
>08_02_0216 +
14390739-14390847,14390983-14391017,14391112-14391153,
14391253-14391346,14391476-14391672,14392407-14392424,
14392938-14393182,14393300-14393657,14393741-14394316,
14395172-14395447
Length = 649
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = -2
Query: 270 FRTSRGNIDCNPT*RQPLSLPIPKH---YLKNLYP 175
FRT R N D N R P L I H YL +YP
Sbjct: 431 FRTHRANSDSNLKYRNPKYLSILNHLRFYLPEIYP 465
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 407 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 273
D F+G + I LRG+ +HVLDE RS++D VL+
Sbjct: 327 DRLIHFSGV-EMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 368
>07_03_0398 -
17690979-17690998,17691034-17691446,17691709-17691764,
17691922-17692054,17694244-17694403,17694862-17694955,
17695791-17695928,17696017-17696174,17696729-17696810,
17697055-17697151,17698703-17698824,17699833-17699910,
17700437-17700565,17701301-17701531
Length = 636
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 529 LKSGLTVGGSVESIL-FTPTMSCLTPRVKASKACSRV*PFLEIPASNSP 386
L+ T G S E+ L F P T V S +CSR FL I + SP
Sbjct: 399 LRGAKTAGASEEAALQFVPMKKQPTASVAYSDSCSRSPNFLTIKNALSP 447
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,188,305
Number of Sequences: 37544
Number of extensions: 276813
Number of successful extensions: 763
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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