Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10480X
(538 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 180 6e-48
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 180 6e-48
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 180 6e-48
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 173 7e-46
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 6e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.86
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.6
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.0
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.0
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.0
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 180 bits (439), Expect = 6e-48
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH
Sbjct: 4 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 63
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEPP 509
ALLAFTLGVKQLIVGVNKMDSTEPP
Sbjct: 64 ALLAFTLGVKQLIVGVNKMDSTEPP 88
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 509 YSEPRFEEIK 538
YSE RFEEIK
Sbjct: 89 YSETRFEEIK 98
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 180 bits (439), Expect = 6e-48
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH
Sbjct: 20 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 79
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEPP 509
ALLAFTLGVKQLIVGVNKMDSTEPP
Sbjct: 80 ALLAFTLGVKQLIVGVNKMDSTEPP 104
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 509 YSEPRFEEIK 538
YSE RFEEIK
Sbjct: 105 YSETRFEEIK 114
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 180 bits (439), Expect = 6e-48
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH
Sbjct: 77 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEPP 509
ALLAFTLGVKQLIVGVNKMDSTEPP
Sbjct: 137 ALLAFTLGVKQLIVGVNKMDSTEPP 161
Score = 105 bits (253), Expect = 2e-25
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG 178
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE+G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 50
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 509 YSEPRFEEIK 538
YSE RFEEIK
Sbjct: 162 YSETRFEEIK 171
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 173 bits (422), Expect = 7e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREH
Sbjct: 77 LWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEPP 509
ALLAFTLGVKQLIVGVNKMD T+PP
Sbjct: 137 ALLAFTLGVKQLIVGVNKMDMTDPP 161
Score = 105 bits (253), Expect = 2e-25
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG 178
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE+G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 50
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 509 YSEPRFEEIK 538
YSE RFEEIK
Sbjct: 162 YSEARFEEIK 171
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 34.7 bits (76), Expect = 6e-04
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +3
Query: 285 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 464
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 465 QLIVGVNKMD 494
+IV +NK+D
Sbjct: 247 PIIVAINKID 256
Score = 25.4 bits (53), Expect = 0.37
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 41 KTHINIVVIGHVDSGKST 94
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.86
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 50 INIVVIGHVDSGKST 94
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 270 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 371
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 270 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 371
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 DKRTIEKFEKEAQEIG 178
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 431 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 345
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 DKRTIEKFEKEAQEIG 178
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 DKRTIEKFEKEAQEIG 178
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,849
Number of Sequences: 438
Number of extensions: 2808
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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