Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10480X
(538 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 150 7e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 150 7e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 150 7e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 150 7e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 100 7e-22
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 91 3e-19
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 68 3e-12
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 66 1e-11
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.003
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.003
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 38 0.004
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.006
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 37 0.010
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 37 0.010
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.013
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.091
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.091
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.16
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.16
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.16
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.49
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 0.64
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 0.85
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 0.85
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.1
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.1
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.5
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 3.4
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 3.4
At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase NAD-bi... 28 4.5
At3g08870.1 68416.m01031 lectin protein kinase, putative similar... 27 6.0
At3g02090.2 68416.m00175 mitochondrial processing peptidase beta... 27 6.0
At3g02090.1 68416.m00174 mitochondrial processing peptidase beta... 27 6.0
At1g47765.1 68414.m05312 F-box family protein contains F-box dom... 27 6.0
At5g44910.1 68418.m05506 Toll-Interleukin-Resistance (TIR) domai... 27 7.9
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 27 7.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 150 bits (363), Expect = 7e-37
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREH
Sbjct: 77 LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEP 506
ALLAFTLGVKQ+I NKMD+T P
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTP 160
Score = 95.5 bits (227), Expect = 2e-20
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG*RFF 190
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ R F
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 54
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (363), Expect = 7e-37
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREH
Sbjct: 77 LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEP 506
ALLAFTLGVKQ+I NKMD+T P
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTP 160
Score = 95.5 bits (227), Expect = 2e-20
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG*RFF 190
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ R F
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 54
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (363), Expect = 7e-37
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREH
Sbjct: 77 LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEP 506
ALLAFTLGVKQ+I NKMD+T P
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTP 160
Score = 95.5 bits (227), Expect = 2e-20
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG*RFF 190
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ R F
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 54
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (363), Expect = 7e-37
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +3
Query: 255 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 434
LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREH
Sbjct: 77 LWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREH 136
Query: 435 ALLAFTLGVKQLIVGVNKMDSTEP 506
ALLAFTLGVKQ+I NKMD+T P
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTP 160
Score = 95.5 bits (227), Expect = 2e-20
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEIG*RFF 190
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E+ R F
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 54
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 100 bits (239), Expect = 7e-22
Identities = 49/85 (57%), Positives = 60/85 (70%)
Frame = +3
Query: 264 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 443
FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH L
Sbjct: 174 FETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQL 233
Query: 444 AFTLGVKQLIVGVNKMDSTEPPTVS 518
A TLGV +LIV VNKMD PTV+
Sbjct: 234 AKTLGVSKLIVVVNKMDD---PTVN 255
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = +2
Query: 38 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE 172
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKD 142
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 91.5 bits (217), Expect = 3e-19
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +3
Query: 264 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHAL 440
F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA
Sbjct: 312 FNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHAR 371
Query: 441 LAFTLGVKQLIVGVNKMD 494
+ GV+Q+IV +NKMD
Sbjct: 372 VLRGFGVEQVIVAINKMD 389
Score = 50.4 bits (115), Expect = 7e-07
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +2
Query: 44 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQ 169
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAK 279
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 68.1 bits (159), Expect = 3e-12
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +3
Query: 261 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 440
++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 441 LAFTLGVKQLIVGVNKMDSTEPP 509
LA +GV L+ +NK+D + P
Sbjct: 177 LARQVGVPSLVCFLNKVDVVDDP 199
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 35 KEKTHINIVVIGHVDSGKSTTT 100
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 261 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 440
++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 136 EYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 188
Query: 441 LAFTLGVKQLIVGVNKMDSTE 503
LA +GV ++V +NK D +
Sbjct: 189 LAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 26 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 160
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 270 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 449
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 450 TLGVKQLIVGVNKMD 494
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 270 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 449
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 450 TLGVKQLIVGVNKMD 494
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 264 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 431
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 432 HALLAFTLGVKQLIVGVNKMD 494
H + +K +I+ NK+D
Sbjct: 166 HLAAVEIMQLKHIIILQNKID 186
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 282 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 461
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 462 KQLIVGVNKMD 494
K +I+ NK+D
Sbjct: 174 KDIIIIQNKID 184
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 36.7 bits (81), Expect = 0.010
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +3
Query: 249 YCLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 428
YC WK Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 127 YCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 182
Query: 429 EH 434
+
Sbjct: 183 RY 184
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCGGI 130
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 36.7 bits (81), Expect = 0.010
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +3
Query: 249 YCLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 428
YC WK Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 127 YCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 182
Query: 429 EH 434
+
Sbjct: 183 RY 184
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCGGI 130
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 36.3 bits (80), Expect = 0.013
Identities = 28/90 (31%), Positives = 41/90 (45%)
Frame = +3
Query: 267 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 446
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 447 FTLGVKQLIVGVNKMDSTEPPTVSPDLRKS 536
F + ++ +NK+D PT P+ K+
Sbjct: 184 FEANL-TIVPVINKIDQ---PTADPERVKA 209
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 17 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 136
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.091
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 270 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 389
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.091
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 270 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 389
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 285 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 389
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCGG 127
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 279 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 389
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 41 KTHINIVVIGHVDSGKSTTTGHLIYKCG 124
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.1 bits (67), Expect = 0.49
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 264 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 443
+E + + + +ID PGH DF + + + A+L+V A G EA QT + L
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYL 199
Query: 444 AFTLGVKQLIVGVNKMD--STEPPTVSPDLRK 533
A + ++I +NK+D EP V ++ +
Sbjct: 200 ALENNL-EIIPVLNKIDLPGAEPEKVLREIEE 230
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 151
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 30.7 bits (66), Expect = 0.64
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 294 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 470
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 471 IVGVNKMDSTEPPTV 515
+ +DS E V
Sbjct: 286 NLSTFTLDSDEEDEV 300
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 0.85
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 291 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 470
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 471 IVGVNKMD 494
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 0.85
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 285 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 464
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 465 QLIVGVNKMD 494
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 291 IIDAPGHRDFIKNMITGTSQADCAVLIV 374
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 291 IIDAPGHRDFIKNMITGTSQADCAVLIV 374
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 273 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 374
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 53 NIVVIGHVDSGKSTTTGHLIYKCG 124
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -3
Query: 377 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPEAIS 246
++D+HS +L+ D + D + ++ N+VL F P+ ++
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVN 95
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 294 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 473
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 474 VGVNKMD 494
+ +NK+D
Sbjct: 609 IAINKID 615
>At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 318
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 169 GNWVKVLQIMLGN-GQT*GLTLSGITIDIASGSSKLA 276
GN+ V ++LG+ G GLT G+T+D+ S LA
Sbjct: 99 GNFNDVRSLLLGDDGVLSGLTPGGVTVDMTSSKPGLA 135
>At3g08870.1 68416.m01031 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 693
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = -3
Query: 413 LRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPEAISIVIP 234
+R+ E G + ++L+G C H + + + I +G++ ++ P IV+P
Sbjct: 406 VREFMAEIESLGRLGHKNLVNLQGWCKHKNELLLIYDYIPNGSLDSLLYQTPRRNGIVLP 465
Query: 233 LNV 225
+V
Sbjct: 466 WDV 468
>At3g02090.2 68416.m00175 mitochondrial processing peptidase beta
subunit, putative similar to mitochondrial processing
peptidase beta subunit, mitochondrial precursor,
Beta-MPP [Human] SWISS-PROT:O75439
Length = 535
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 104 HLIYKCGGIDKRTIEKFEKEAQEIG 178
H+I+K G D+RT+ E+E ++IG
Sbjct: 145 HMIFK--GTDRRTVRALEEEIEDIG 167
>At3g02090.1 68416.m00174 mitochondrial processing peptidase beta
subunit, putative similar to mitochondrial processing
peptidase beta subunit, mitochondrial precursor,
Beta-MPP [Human] SWISS-PROT:O75439
Length = 531
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 104 HLIYKCGGIDKRTIEKFEKEAQEIG 178
H+I+K G D+RT+ E+E ++IG
Sbjct: 145 HMIFK--GTDRRTVRALEEEIEDIG 167
>At1g47765.1 68414.m05312 F-box family protein contains F-box domain
Pfam:PF00646
Length = 385
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 270 FRTSRGNIDCNPT*RQPLSLPIPKHYLKNL 181
F+TS+ I NP+ RQ ++LPIP+ N+
Sbjct: 126 FKTSKMPIVWNPSKRQLITLPIPRLSWNNI 155
>At5g44910.1 68418.m05506 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 241
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +3
Query: 237 DYNRYCLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 416
++ +Y +W + V + A +R I+N+ T +++ AV+I + E E +++
Sbjct: 25 NFIKYLVWGLRDERVNVFVDRAEANRRDIRNISTKIEESNIAVVIFSKRYTESEMCLNEL 84
Query: 417 GQTREH 434
+ EH
Sbjct: 85 QKMYEH 90
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 467 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSIN 294
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNN 768
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,161,825
Number of Sequences: 28952
Number of extensions: 215082
Number of successful extensions: 661
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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