Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10479X
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       20   7.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   9.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 55  GDNHNLGHFVL 23
           GD HN+GH ++
Sbjct: 360 GDFHNMGHILI 370


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 28 QNVQDCDYRPC 60
          +N+ DC   PC
Sbjct: 67 ENINDCKVNPC 77


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 55  GDNHNLGH 32
           GD HN+GH
Sbjct: 360 GDLHNMGH 367


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 315 LVVPVAISLLFVA 277
           L +PV+ISLL  A
Sbjct: 414 LTIPVSISLLIAA 426


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 315 LVVPVAISLLFVA 277
           L +PV+ISLL  A
Sbjct: 414 LTIPVSISLLIAA 426


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 315 LVVPVAISLLFVA 277
           L +PV+ISLL  A
Sbjct: 414 LTIPVSISLLIAA 426


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 315 LVVPVAISLLFVA 277
           L +PV+ISLL  A
Sbjct: 414 LTIPVSISLLIAA 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,964
Number of Sequences: 336
Number of extensions: 363
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)