Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10477
(820 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 169 1e-42
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 169 1e-42
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 169 1e-42
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 169 1e-42
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 169 3e-42
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 169 3e-42
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 165 2e-41
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 110 1e-24
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 108 4e-24
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 108 4e-24
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 108 4e-24
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 107 1e-23
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 106 2e-23
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 106 2e-23
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 105 3e-23
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 101 4e-22
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 73 3e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 72 4e-13
At4g38980.1 68417.m05523 expressed protein 32 0.40
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 30 1.6
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 2.1
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.8
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.7
At4g37190.1 68417.m05265 expressed protein 28 6.5
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 6.5
At5g58670.1 68418.m07351 phosphoinositide-specific phospholipase... 28 8.6
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 28 8.6
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 28 8.6
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 169 bits (412), Expect = 1e-42
Identities = 81/104 (77%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 139 bits (336), Expect = 2e-33
Identities = 61/81 (75%), Positives = 74/81 (91%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNE 207
Query: 690 AIYDICRRNLDIERPTYTNLN 752
AIYDICRR+L+IERPTYTNLN
Sbjct: 208 AIYDICRRSLNIERPTYTNLN 228
Score = 137 bits (331), Expect = 9e-33
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 764 QIVSSITASLRFDGALNVD 820
Q++SS+TASLRFDGALNVD
Sbjct: 233 QVISSLTASLRFDGALNVD 251
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 169 bits (412), Expect = 1e-42
Identities = 81/104 (77%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 139 bits (336), Expect = 2e-33
Identities = 61/81 (75%), Positives = 74/81 (91%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNE 207
Query: 690 AIYDICRRNLDIERPTYTNLN 752
AIYDICRR+L+IERPTYTNLN
Sbjct: 208 AIYDICRRSLNIERPTYTNLN 228
Score = 137 bits (331), Expect = 9e-33
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 764 QIVSSITASLRFDGALNVD 820
Q++SS+TASLRFDGALNVD
Sbjct: 233 QVISSLTASLRFDGALNVD 251
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 169 bits (412), Expect = 1e-42
Identities = 81/104 (77%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 138 bits (335), Expect = 3e-33
Identities = 61/81 (75%), Positives = 73/81 (90%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNE 207
Query: 690 AIYDICRRNLDIERPTYTNLN 752
AIYDICRR+L IERPTYTNLN
Sbjct: 208 AIYDICRRSLSIERPTYTNLN 228
Score = 138 bits (334), Expect = 4e-33
Identities = 55/63 (87%), Positives = 62/63 (98%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 764 QIVSSITASLRFDGALNVD 820
Q++SS+TASLRFDGALNVD
Sbjct: 233 QVISSLTASLRFDGALNVD 251
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 169 bits (412), Expect = 1e-42
Identities = 81/104 (77%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 138 bits (335), Expect = 3e-33
Identities = 61/81 (75%), Positives = 73/81 (90%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNE 207
Query: 690 AIYDICRRNLDIERPTYTNLN 752
AIYDICRR+L IERPTYTNLN
Sbjct: 208 AIYDICRRSLSIERPTYTNLN 228
Score = 138 bits (334), Expect = 4e-33
Identities = 55/63 (87%), Positives = 62/63 (98%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 764 QIVSSITASLRFDGALNVD 820
Q++SS+TASLRFDGALNVD
Sbjct: 233 QVISSLTASLRFDGALNVD 251
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 169 bits (410), Expect = 3e-42
Identities = 79/104 (75%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 143 bits (347), Expect = 1e-34
Identities = 65/81 (80%), Positives = 74/81 (91%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNE
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNE 207
Query: 690 AIYDICRRNLDIERPTYTNLN 752
AIYDICRR+LDIERPTYTNLN
Sbjct: 208 AIYDICRRSLDIERPTYTNLN 228
Score = 120 bits (288), Expect = 2e-27
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 764 QIVSSITASLRFDGALNVD 820
QI+SS+T SLRFDGA+NVD
Sbjct: 233 QIISSLTTSLRFDGAINVD 251
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 169 bits (410), Expect = 3e-42
Identities = 79/104 (75%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 143 bits (347), Expect = 1e-34
Identities = 65/81 (80%), Positives = 74/81 (91%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNE
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNE 207
Query: 690 AIYDICRRNLDIERPTYTNLN 752
AIYDICRR+LDIERPTYTNLN
Sbjct: 208 AIYDICRRSLDIERPTYTNLN 228
Score = 120 bits (288), Expect = 2e-27
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 764 QIVSSITASLRFDGALNVD 820
QI+SS+T SLRFDGA+NVD
Sbjct: 233 QIISSLTTSLRFDGAINVD 251
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 165 bits (402), Expect = 2e-41
Identities = 77/104 (74%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F S Q PRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 138 bits (335), Expect = 3e-33
Identities = 62/81 (76%), Positives = 73/81 (90%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G SLL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNE
Sbjct: 148 GLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNE 207
Query: 690 AIYDICRRNLDIERPTYTNLN 752
AIYDICRR+LDIERPTY+NLN
Sbjct: 208 AIYDICRRSLDIERPTYSNLN 228
Score = 114 bits (275), Expect = 6e-26
Identities = 45/63 (71%), Positives = 55/63 (87%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 34.3 bits (75), Expect = 0.099
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 764 QIVSSITASLRFDGALNVD 820
Q +SS+T SLRFDGA+NVD
Sbjct: 233 QTISSLTTSLRFDGAINVD 251
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 110 bits (264), Expect = 1e-24
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 146 GMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + P++ +LN
Sbjct: 206 ALYDICFRTLKLTTPSFGDLN 226
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 241
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 242 AGKHDP 259
G++ P
Sbjct: 56 CGRYVP 61
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 108 bits (260), Expect = 4e-24
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 146 GMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + P++ +LN
Sbjct: 206 ALYDICFRTLKLTTPSFGDLN 226
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 251 HDP 259
P
Sbjct: 59 FVP 61
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 108 bits (260), Expect = 4e-24
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 80.2 bits (189), Expect = 2e-15
Identities = 32/81 (39%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 146 GMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + P++ +LN
Sbjct: 206 ALYDICFRTLKLSTPSFGDLN 226
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 108 bits (260), Expect = 4e-24
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 122 RKEAENCDCLQGFQVCHSLGGGTGSG 147
Score = 81.0 bits (191), Expect = 9e-16
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 147 GMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 206
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + P++ +LN
Sbjct: 207 ALYDICFRTLKLSTPSFGDLN 227
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 251 HDP 259
+ P
Sbjct: 60 YVP 62
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 107 bits (256), Expect = 1e-23
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 122 RKEAENCDCLQGFQVCHSLGGGTGSG 147
Score = 81.0 bits (191), Expect = 9e-16
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 147 GMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 206
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + P++ +LN
Sbjct: 207 ALYDICFRTLKLSTPSFGDLN 227
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 251 HDP 259
+ P
Sbjct: 60 YVP 62
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 106 bits (254), Expect = 2e-23
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 146 GMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + P++ +LN
Sbjct: 206 ALYDICFRTLKLTTPSFGDLN 226
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 251 HDP 259
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 106 bits (254), Expect = 2e-23
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 146 GMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + P++ +LN
Sbjct: 206 ALYDICFRTLKLTTPSFGDLN 226
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 251 HDP 259
P
Sbjct: 59 FVP 61
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 105 bits (253), Expect = 3e-23
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 81.8 bits (193), Expect = 5e-16
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 146 GMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + PT+ +LN
Sbjct: 206 ALYDICFRTLKLANPTFGDLN 226
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 101 bits (243), Expect = 4e-22
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ LQGF + HS GGGTG G
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSG 146
Score = 81.8 bits (193), Expect = 5e-16
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 689
G +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE
Sbjct: 146 GMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
Query: 690 AIYDICRRNLDIERPTYTNLN 752
A+YDIC R L + PT+ +LN
Sbjct: 206 ALYDICFRTLKLANPTFGDLN 226
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLD 429
PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMD 120
Query: 430 RIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY 525
I + AD L+GF++ HS GGTG G Y
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 686
G S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++DN
Sbjct: 148 GMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDN 207
Query: 687 EAIYDICRRNLDIERPTYTNLN 752
A+ I L + PT+ N
Sbjct: 208 TALGRIAVERLHLTNPTFAQTN 229
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 229
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLD 429
PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMD 120
Query: 430 RIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY 525
I + AD L+GF++ HS GGTG G Y
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 510 GFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 686
G S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++DN
Sbjct: 148 GMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDN 207
Query: 687 EAIYDICRRNLDIERPTYTNLN 752
A+ I L + PT+ N
Sbjct: 208 TALNRIAVERLHLTNPTFAQTN 229
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 229
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At4g38980.1 68417.m05523 expressed protein
Length = 280
Score = 32.3 bits (70), Expect = 0.40
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Frame = -2
Query: 492 EGVEDQESLQTGTLVSELADSVQNQIY--DFLS----NXXXXXXXXXGRIFLTSNKLFWM 331
E +E+ S+ G E SV +Q++ DF+S + + +TS ++F +
Sbjct: 156 ESIEEDGSVSNGEAKEEKPASVSSQVFKDDFMSTYVEDNAEDCNVTEDPVKVTSQEIFKV 215
Query: 330 KQLSVCASAD----LINNSRFKIDEDSTGSCLPAPVSLKKVLKESS 205
L V D L+ + +DE ST LP P++ +V+ E S
Sbjct: 216 WDLEVVGDNDEEDGLVLQLKKALDESSTVQPLPQPLNDDQVVSEKS 261
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 294 NNSRFKIDEDSTGSCLPAPVSLKKVLKESSPPPM 193
N R K S+ S L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 725 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 591
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 507 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 409
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 240 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 115
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1
Query: 217 QHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 396
+H + ++++ + + + L+ V E T + +HP+ L ++ A +Y
Sbjct: 125 EHVVGKEKAKEIEDKDIVGCLDEEV--ECWTDFSKSHYHPQSLYELNGLWMDSQAFNNYG 182
Query: 397 IGKEIV------DLVLDRIRKLADQCTGLQGFLIFHSFGGG 501
IGK++ + + DR+R ++C +QG GG
Sbjct: 183 IGKDVFSEASRGEEICDRLRFFVEECDHIQGIKFLVDDSGG 223
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +3
Query: 543 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 704
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 705 CRRNLDIERPTYTNL 749
+ + E+ Y+++
Sbjct: 343 VKPEAESEKVVYSSV 357
>At5g58670.1 68418.m07351 phosphoinositide-specific phospholipase C
(PLC1) identical to phosphoinositide specific
phospholipase C [Arabidopsis thaliana] GI:902923
Length = 561
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 267 DSTGSCLPAPVSLK-KVLKESSPPPMVLSVGI 175
D T C P+P SLK K+L + PP L I
Sbjct: 228 DETTECFPSPESLKNKILISTKPPKEYLQTQI 259
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 156 ASSLMARCPQTRPSGVETILSTLSSARPELASTTP 260
AS+ +R P + + TI ++S++ PEL+S TP
Sbjct: 862 ASNKKSRVPLPKANEKSTISRSVSTSSPELSSNTP 896
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 177 CPQTRPSGVETILSTLSSARPELASTTPCCLRRS*TYCC**GPHWH 314
CP R SG+ + + LS++ E ST CC++ +C WH
Sbjct: 242 CPNPRCSGLMS-KTELSTSTEEDVSTRTCCVKCGEPFCINCKVPWH 286
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,079,713
Number of Sequences: 28952
Number of extensions: 405012
Number of successful extensions: 1325
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -