Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10476
(817 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 157 4e-38
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 157 4e-38
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 157 4e-38
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 157 4e-38
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 157 4e-38
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 157 4e-38
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 157 4e-38
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 157 4e-38
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 157 4e-38
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 130 6e-30
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 31 3.8
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 31 5.0
AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor ... 31 5.0
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 31 6.6
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 31 6.6
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 31 6.6
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 229
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 230 PAGRKVGLIAARRTGRLRGTKT 251
Score = 142 bits (344), Expect = 1e-33
Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L +GNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Score = 138 bits (334), Expect = 2e-32
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
MGRVIR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 184 VHFRDPYKFKTRKELFIAPEG 246
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 229
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 230 PAGRKVGLIAARRTGRLRGTKT 251
Score = 142 bits (344), Expect = 1e-33
Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L +GNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Score = 138 bits (334), Expect = 2e-32
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
MGRVIR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 184 VHFRDPYKFKTRKELFIAPEG 246
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 229
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 230 PAGRKVGLIAARRTGRLRGTKT 251
Score = 142 bits (345), Expect = 1e-33
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L VGNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Score = 138 bits (334), Expect = 2e-32
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
MGRVIR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 184 VHFRDPYKFKTRKELFIAPEG 246
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 229
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 230 PAGRKVGLIAARRTGRLRGTKT 251
Score = 142 bits (344), Expect = 1e-33
Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L +GNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Score = 138 bits (334), Expect = 2e-32
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
MGRVIR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 184 VHFRDPYKFKTRKELFIAPEG 246
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 229
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 230 PAGRKVGLIAARRTGRLRGTKT 251
Score = 142 bits (345), Expect = 1e-33
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L VGNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Score = 138 bits (334), Expect = 2e-32
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
MGRVIR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 184 VHFRDPYKFKTRKELFIAPEG 246
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 229
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 230 PAGRKVGLIAARRTGRLRGTKT 251
Score = 142 bits (345), Expect = 1e-33
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L VGNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Score = 138 bits (334), Expect = 2e-32
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
MGRVIR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 184 VHFRDPYKFKTRKELFIAPEG 246
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 229
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 230 PAGRKVGLIAARRTGRLRGTKT 251
Score = 142 bits (344), Expect = 1e-33
Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L +GNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Score = 138 bits (334), Expect = 2e-32
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
MGRVIR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 184 VHFRDPYKFKTRKELFIAPEG 246
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 124 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 183
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 184 PAGRKVGLIAARRTGRLRGTKT 205
Score = 142 bits (344), Expect = 1e-33
Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L +GNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 34 EGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 93
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 94 NPETKKTRVKLPSGSKKVISSANRAVVGVV 123
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = +1
Query: 142 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 246
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 35
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 157 bits (381), Expect = 4e-38
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
+GGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDA 229
Query: 688 SAGRKVGLIAARKTGRIRGGKT 753
AGRKVGLIAAR+TGR+RG KT
Sbjct: 230 PAGRKVGLIAARRTGRLRGTKT 251
Score = 142 bits (344), Expect = 1e-33
Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGH 418
+ +H+ QFVYCGKKA L +GNV+PVG MPEGTIVC L EK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 419 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
NP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRAVVGVV 169
Score = 138 bits (334), Expect = 2e-32
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 4 MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
MGRVIR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 184 VHFRDPYKFKTRKELFIAPEG 246
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 130 bits (314), Expect = 6e-30
Identities = 59/77 (76%), Positives = 67/77 (87%)
Frame = +1
Query: 16 IRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 195
IR QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 196 DPYKFKTRKELFIAPEG 246
DPY+FK R ELFIA EG
Sbjct: 61 DPYRFKKRTELFIAAEG 77
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/55 (72%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 KALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFA 403
+ +H+ QFVYCGKKA L +GNV+PVG MPEGTIVC L EK GDRG+LARASGN+A
Sbjct: 76 EGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 31.5 bits (68), Expect = 3.8
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +2
Query: 296 GNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 475
G+ P+GA+P GT++ N+ + G + RA+G ++ + ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLPSKRQMQV 236
Query: 476 PSSNRGMVGIVLEVD 520
+ VG V VD
Sbjct: 237 LETCVATVGRVSNVD 251
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 251 VEPSGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 126
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor
alpha 2 isoform protein.
Length = 54
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 251 VEPSGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 126
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 296 GNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVI 412
G+ P+GA+P GT++ N+ + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 296 GNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVI 412
G+ P+GA+P GT++ N+ + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 296 GNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGNFATVI 412
G+ P+GA+P GT++ N+ + G + RA+G ++
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 214
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,573,718
Number of Sequences: 237096
Number of extensions: 3158899
Number of successful extensions: 6185
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6185
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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