Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10473
(693 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011163-1|AAR82831.1| 453|Drosophila melanogaster AT16061p pro... 37 0.023
AE014298-3053|AAF50881.1| 407|Drosophila melanogaster CG15450-P... 37 0.023
AY051906-1|AAK93330.1| 458|Drosophila melanogaster LD39624p pro... 32 0.64
AE013599-3805|AAM68301.1| 458|Drosophila melanogaster CG3209-PB... 32 0.64
AE013599-3804|AAF47157.1| 537|Drosophila melanogaster CG3209-PA... 32 0.64
BT021942-1|AAX51647.1| 902|Drosophila melanogaster RE24732p pro... 29 4.5
AY768537-1|AAV54101.1| 902|Drosophila melanogaster GluRIID prot... 29 4.5
AY768536-1|AAV54100.1| 902|Drosophila melanogaster GluRIID prot... 29 4.5
AJ251889-1|CAB64942.1| 902|Drosophila melanogaster ionotropic g... 29 4.5
AJ251888-1|CAB64941.1| 902|Drosophila melanogaster ionotropic g... 29 4.5
AE014297-2837|AAG22164.2| 902|Drosophila melanogaster CG18039-P... 29 4.5
AE014134-237|AAF51385.1| 210|Drosophila melanogaster CG5430-PA ... 29 6.0
AY058323-1|AAL13552.1| 556|Drosophila melanogaster GH09295p pro... 29 7.9
AE013599-541|AAF59168.1| 556|Drosophila melanogaster CG8728-PA ... 29 7.9
>BT011163-1|AAR82831.1| 453|Drosophila melanogaster AT16061p
protein.
Length = 453
Score = 37.1 bits (82), Expect = 0.023
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 522 PVLIQPESGPTNGKAVLRFTDWPFQIKSHVQPVAITVERAFTRATVQRRQYS 677
PVL+ PE N AV++F F + V PVAI +R F A +YS
Sbjct: 334 PVLLFPEGTCINNTAVMQFKKGSFAVSDVVHPVAIRYDRRFGEAYWDSTRYS 385
>AE014298-3053|AAF50881.1| 407|Drosophila melanogaster CG15450-PA
protein.
Length = 407
Score = 37.1 bits (82), Expect = 0.023
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 522 PVLIQPESGPTNGKAVLRFTDWPFQIKSHVQPVAITVERAFTRATVQRRQYS 677
PVL+ PE N AV++F F + V PVAI +R F A +YS
Sbjct: 288 PVLLFPEGTCINNTAVMQFKKGSFAVSDVVHPVAIRYDRRFGEAYWDSTRYS 339
>AY051906-1|AAK93330.1| 458|Drosophila melanogaster LD39624p
protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.64
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 522 PVLIQPESGPTNGKAVLRFTDWPFQIKSHVQPVAITVERAFTRATVQRRQYS 677
P+LI PE N +V++F F++ + PVAI + F A +YS
Sbjct: 323 PILIFPEGTCINNTSVMQFKKGSFEVGGVIYPVAIKYDPRFGDAFWNSAKYS 374
>AE013599-3805|AAM68301.1| 458|Drosophila melanogaster CG3209-PB,
isoform B protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.64
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 522 PVLIQPESGPTNGKAVLRFTDWPFQIKSHVQPVAITVERAFTRATVQRRQYS 677
P+LI PE N +V++F F++ + PVAI + F A +YS
Sbjct: 323 PILIFPEGTCINNTSVMQFKKGSFEVGGVIYPVAIKYDPRFGDAFWNSAKYS 374
>AE013599-3804|AAF47157.1| 537|Drosophila melanogaster CG3209-PA,
isoform A protein.
Length = 537
Score = 32.3 bits (70), Expect = 0.64
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 522 PVLIQPESGPTNGKAVLRFTDWPFQIKSHVQPVAITVERAFTRATVQRRQYS 677
P+LI PE N +V++F F++ + PVAI + F A +YS
Sbjct: 402 PILIFPEGTCINNTSVMQFKKGSFEVGGVIYPVAIKYDPRFGDAFWNSAKYS 453
>BT021942-1|AAX51647.1| 902|Drosophila melanogaster RE24732p protein.
Length = 902
Score = 29.5 bits (63), Expect = 4.5
Identities = 27/109 (24%), Positives = 44/109 (40%)
Frame = +1
Query: 43 IKNIWQTA*IFNKTSIYIFGDGSCGRKVNQQREIQWRKCIAIFTVFTNWSYSDGDQNIPG 222
+KN W FNK + + G R N+ W + A V + S DG + G
Sbjct: 757 VKN-WPYRDKFNKALLELQEQGVLARLKNKW----WNEVGA--GVCSAKSDDDGPSEL-G 808
Query: 223 CDIMDCINYIANKWAVSHMLTTLACWTFGVYVKLKGQRDPRCSVLVANY 369
D + I + ++ ++ ++ CW + VY K K P C L +
Sbjct: 809 VDNLSGIYVVLVIGSIISIIISILCWCYFVYKKAKNYEVPFCDALAEEF 857
>AY768537-1|AAV54101.1| 902|Drosophila melanogaster GluRIID protein.
Length = 902
Score = 29.5 bits (63), Expect = 4.5
Identities = 27/109 (24%), Positives = 44/109 (40%)
Frame = +1
Query: 43 IKNIWQTA*IFNKTSIYIFGDGSCGRKVNQQREIQWRKCIAIFTVFTNWSYSDGDQNIPG 222
+KN W FNK + + G R N+ W + A V + S DG + G
Sbjct: 757 VKN-WPYRDKFNKALLELQEQGVLARLKNKW----WNEVGA--GVCSAKSDDDGPSEL-G 808
Query: 223 CDIMDCINYIANKWAVSHMLTTLACWTFGVYVKLKGQRDPRCSVLVANY 369
D + I + ++ ++ ++ CW + VY K K P C L +
Sbjct: 809 VDNLSGIYVVLVIGSIISIIISILCWCYFVYKKAKNYEVPFCDALAEEF 857
>AY768536-1|AAV54100.1| 902|Drosophila melanogaster GluRIID protein.
Length = 902
Score = 29.5 bits (63), Expect = 4.5
Identities = 27/109 (24%), Positives = 44/109 (40%)
Frame = +1
Query: 43 IKNIWQTA*IFNKTSIYIFGDGSCGRKVNQQREIQWRKCIAIFTVFTNWSYSDGDQNIPG 222
+KN W FNK + + G R N+ W + A V + S DG + G
Sbjct: 757 VKN-WPYRDKFNKALLELQEQGVLARLKNKW----WNEVGA--GVCSAKSDDDGPSEL-G 808
Query: 223 CDIMDCINYIANKWAVSHMLTTLACWTFGVYVKLKGQRDPRCSVLVANY 369
D + I + ++ ++ ++ CW + VY K K P C L +
Sbjct: 809 VDNLSGIYVVLVIGSIISIIISILCWCYFVYKKAKNYEVPFCDALAEEF 857
>AJ251889-1|CAB64942.1| 902|Drosophila melanogaster ionotropic
glutamate receptorsubunit IA protein.
Length = 902
Score = 29.5 bits (63), Expect = 4.5
Identities = 27/109 (24%), Positives = 44/109 (40%)
Frame = +1
Query: 43 IKNIWQTA*IFNKTSIYIFGDGSCGRKVNQQREIQWRKCIAIFTVFTNWSYSDGDQNIPG 222
+KN W FNK + + G R N+ W + A V + S DG + G
Sbjct: 757 VKN-WPYRDKFNKALLELQEQGVLARLKNKW----WNEVGA--GVCSAKSDDDGPSEL-G 808
Query: 223 CDIMDCINYIANKWAVSHMLTTLACWTFGVYVKLKGQRDPRCSVLVANY 369
D + I + ++ ++ ++ CW + VY K K P C L +
Sbjct: 809 VDNLSGIYVVLVIGSIISIIISILCWCYFVYKKAKNYEVPFCDALAEEF 857
>AJ251888-1|CAB64941.1| 902|Drosophila melanogaster ionotropic
glutamate receptorsubunit IA protein.
Length = 902
Score = 29.5 bits (63), Expect = 4.5
Identities = 27/109 (24%), Positives = 44/109 (40%)
Frame = +1
Query: 43 IKNIWQTA*IFNKTSIYIFGDGSCGRKVNQQREIQWRKCIAIFTVFTNWSYSDGDQNIPG 222
+KN W FNK + + G R N+ W + A V + S DG + G
Sbjct: 757 VKN-WPYRDKFNKALLELQEQGVLARLKNKW----WNEVGA--GVCSAKSDDDGPSEL-G 808
Query: 223 CDIMDCINYIANKWAVSHMLTTLACWTFGVYVKLKGQRDPRCSVLVANY 369
D + I + ++ ++ ++ CW + VY K K P C L +
Sbjct: 809 VDNLSGIYVVLVIGSIISIIISILCWCYFVYKKAKNYEVPFCDALAEEF 857
>AE014297-2837|AAG22164.2| 902|Drosophila melanogaster CG18039-PA
protein.
Length = 902
Score = 29.5 bits (63), Expect = 4.5
Identities = 27/109 (24%), Positives = 44/109 (40%)
Frame = +1
Query: 43 IKNIWQTA*IFNKTSIYIFGDGSCGRKVNQQREIQWRKCIAIFTVFTNWSYSDGDQNIPG 222
+KN W FNK + + G R N+ W + A V + S DG + G
Sbjct: 757 VKN-WPYRDKFNKALLELQEQGVLARLKNKW----WNEVGA--GVCSAKSDDDGPSEL-G 808
Query: 223 CDIMDCINYIANKWAVSHMLTTLACWTFGVYVKLKGQRDPRCSVLVANY 369
D + I + ++ ++ ++ CW + VY K K P C L +
Sbjct: 809 VDNLSGIYVVLVIGSIISIIISILCWCYFVYKKAKNYEVPFCDALAEEF 857
>AE014134-237|AAF51385.1| 210|Drosophila melanogaster CG5430-PA
protein.
Length = 210
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 567 PLYRSWVHFLVVSTQAL 517
P+YRSW+H+LVV+ L
Sbjct: 100 PMYRSWLHWLVVNVPGL 116
>AY058323-1|AAL13552.1| 556|Drosophila melanogaster GH09295p
protein.
Length = 556
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 452 AKNGGNFHLFKL-MVPKTCAAARESIHVT*FATNTLHLGSLCPL 324
A+ NF L L M P+ + IH F NTL L LCPL
Sbjct: 211 ARRAVNFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPL 254
>AE013599-541|AAF59168.1| 556|Drosophila melanogaster CG8728-PA
protein.
Length = 556
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 452 AKNGGNFHLFKL-MVPKTCAAARESIHVT*FATNTLHLGSLCPL 324
A+ NF L L M P+ + IH F NTL L LCPL
Sbjct: 211 ARRAVNFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPL 254
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,530,481
Number of Sequences: 53049
Number of extensions: 821544
Number of successful extensions: 1750
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1750
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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